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Revision a0315fa0ddc4f7433f458268acdf10d32d422bf3 authored by Saskia Hiltemann on 05 July 2019, 13:29:25 UTC, committed by Saskia Hiltemann on 05 July 2019, 13:29:25 UTC 
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abricate
abyss
allegro
anndata
annotatemyids
art
augustus
bam_to_scidx
bandage
barrnap
bayescan
bcftools
bctools
bedtools
berokka
bioext
biom_format
bioperl
blastxml_to_gapped_gff3
bowtie2
busco
bwa
bwameth
cdhit
charts
circos
codeml
colibread
collection_column_join
collection_element_identifiers
column_order_header_sort
column_remove_by_header
coverage_report
crosscontamination_barcode_filter
crossmap
cutadapt
cwpair2
data_source_iris_tcga
datamash
deg_annotate
deseq2
dexseq
diffbind
disco
ebi_tools
edger
egsea
emboss_5
enasearch
exonerate
export2graphlan
extract_genomic_dna
fasta_nucleotide_color_plot
fasta_stats
fastp
fastqc
fasttree
featurecounts
feelnc
fermikit
fgsea
filtlong
flash
fraggenescan
freebayes
gdcwebapp
gemini
genehunter_modscore
genetrack
gff3_rebase
gffcompare
ggplot2
glimmer
goenrichment
goseq
graphlan
gtfToBed12
gubbins
gvcftools
hansel
heatmap2
heinz
hicexplorer
hisat2
hivclustering
hmmer3
htseq_count
humann2
hyphy
idba_ud
idr
intermine_galaxy_exchange
intervene
iqtree
iwtomics
jbrowse
jcvi_gff_stats
join_files_by_id
jq
kallisto
khmer
kobas
kraken_taxonomy_report
lastz
length_and_gc_content
limma_voom
lorikeet
macs2
mageck
maker
mash
masigpro
megahit
megahit_contig2fastg
meme
meme_chip
metagenomeseq
metaphlan2
metaspades
migmap
minimap2
mlst
mothur
msaboot
multigps
multiqc
mummer4
mykrobe
nanoplot
ncbi_entrez_eutils
newick_utils
ngsutils
nonpareil
nugen_nudup
obitools
ococo
onto_toolkit
orthofinder
pe_histogram
pear
picard
picrust
pilon
pizzly
plasflow
porechop
poretools
presto
prinseq
progressivemauve
prokka
pureclip
pygenometracks
qfilt
qiime
quast
query_tabular
raceid
raxml
rcorrector
repeatmasker
repmatch_gff3
reshape2
resize_coordinate_window
rgrnastar
rnaspades
roary
rseqc
ruvseq
samblaster
samtool_filter2
scanpy
scikit-bio
scpipe
seqtk
seurat
shorah
shovill
sickle
slamdunk
snap
snippy
snp-sites
spades
spaln
spotyping
sra-tools
stacks
star_fusion
stringtie
structure
structureharvester
swift
tag_pileup_frequency
taxonomy_filter_refseq
taxonomy_krona_chart
tb-profiler
transdecoder
transit
transtermhp
trinity
trinotate
tsne
ucsc_blat
ucsc_tools
umi_tools
unicycler
valet
varscan
vegan
velvet_optimiser
volcanoplot
vsearch
weather_app
weblogo3
xpath
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