https://github.com/ctlab/phantasus
Revision a9620dd90035eec9b8fe5e5edd1008619317fd19 authored by Alexey Sergushichev on 21 November 2019, 08:57:56 UTC, committed by Alexey Sergushichev on 21 November 2019, 08:57:56 UTC
1 parent 604085f
Tip revision: a9620dd90035eec9b8fe5e5edd1008619317fd19 authored by Alexey Sergushichev on 21 November 2019, 08:57:56 UTC
Fixed direction in DESeq2
Fixed direction in DESeq2
Tip revision: a9620dd
NAMESPACE
# Generated by roxygen2: do not edit by hand
export(getES)
export(getGDS)
export(getGSE)
export(read.gct)
export(reparseCachedESs)
export(servePhantasus)
export(write.gct)
import(Biobase)
import(GEOquery)
import(Rook)
import(ccaPP)
import(ggplot2)
import(grid)
import(gtable)
import(htmltools)
import(httpuv)
import(jsonlite)
import(limma)
import(opencpu)
import(rhdf5)
import(stats)
import(svglite)
importFrom(AnnotationDbi,columns)
importFrom(AnnotationDbi,keys)
importFrom(AnnotationDbi,loadDb)
importFrom(AnnotationDbi,mapIds)
importFrom(AnnotationDbi,species)
importFrom(fgsea,fgseaMultilevel)
importFrom(fgsea,plotEnrichment)
importFrom(ggplot2,ggtitle)
importFrom(grDevices,colorRampPalette)
importFrom(grDevices,dev.off)
importFrom(grDevices,svg)
importFrom(methods,new)
importFrom(parallel,makeCluster)
importFrom(parallel,stopCluster)
importFrom(utils,download.file)
importFrom(utils,getFromNamespace)
importFrom(utils,head)
importFrom(utils,read.table)
importFrom(utils,tail)
importFrom(utils,write.table)
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