https://github.com/ctlab/phantasus
Revision ac8cf6c2eddb66555c2098eba526ea2db6f65366 authored by Vladislav Kamenev on 30 November 2017, 04:09:59 UTC, committed by GitHub on 30 November 2017, 04:09:59 UTC
ERROR: dependency ‘XML’ is not available for package ‘GEOquery’
CRAN репозиторий для devtools
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Tip revision: ac8cf6c2eddb66555c2098eba526ea2db6f65366 authored by Vladislav Kamenev on 30 November 2017, 04:09:59 UTC
Update README.md
Tip revision: ac8cf6c
NEWS
CHANGES IN VERSION 0.99.23
* Added options "Maximum Mean Probe" and "Maximum Median Probe" to Collapse Tool
* Fixed a bug emerging when one applies R-based function after collapsing by columns

CHANGES IN VERSION 0.99.22
* Fixed AdjustTool
* Removed obsolete output produced by servePhantasus
* Updated tutorial

CHANGES IN VERSION 0.99.21
* Merged changes from morpheus.js repository
* Added function `reparseCachedESs` for updating downloaded GEO-datasets, which are saved in cache

CHANGES IN VERSION 0.99.20
* A bit better code coverage with tests

CHANGES IN VERSION 0.99.19
* Safer procedure for phenoData parsing
* Even sample-empty datasets deserve to have displayed meta

CHANGES IN VERSION 0.99.18
* New phenoData parsing strategy for GEO Series

CHANGES IN VERSION 0.99.17
* Fixed issue with null featureData for GSE37270

CHANGES IN VERSION 0.99.16
* Fixed issue with incorrect perfomance of LimmaTool when columns are passed as args

CHANGES IN VERSION 0.99.15
* Updated tutorial

CHANGES IN VERSION 0.99.14
* Correct error messages when dataset is not present in GEO

CHANGES IN VERSTION 0.99.13
* Added possibility to load datasets from preloaded rda-files in specialized directory on server
* servePhantasus now opens browser with web-application automatically on start-up
* Added tutorial on main site
* Updated biocViews
* Updated tutorial and mans according to changes
* Added experimental support for loading RNA-seq dataset from GEO

CHANGES IN VERSION 0.99.12
* Added possibility to load GEO-dataset by specifying its id in link parameters

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