https://github.com/meglab2017/The-microbial-biosphere-of-the-coral-Acropora-cervicornis-in-Northeastern-Puerto-Rico
Revision acf5851080b5159b1e19b3afd81d9782f203f9b4 authored by meglab2017 on 15 August 2017, 02:21:33 UTC, committed by GitHub on 15 August 2017, 02:21:33 UTC
1 parent 6ecc1f9
Tip revision: acf5851080b5159b1e19b3afd81d9782f203f9b4 authored by meglab2017 on 15 August 2017, 02:21:33 UTC
Update README.md
Update README.md
Tip revision: acf5851
taxonomy_L6_R.txt
Taxonomy Facet Shallow1 Shallow2 Shallow3 Deep1 Deep2 Deep3
g__Corynebacterium Rickettsiales + Others 3.57E-05 3.57E-05 0.000321429 0.00025 0.000142857 0.00025
f__Micrococcaceae Rickettsiales + Others 0 0 0 0 0.000535714 0
g__Mycobacterium Rickettsiales + Others 3.57E-05 0 0 3.57E-05 0.000714286 3.57E-05
g__Porphyromonas Rickettsiales + Others 3.57E-05 0.000357143 7.14E-05 0 0 0
g__Prevotella Rickettsiales + Others 0 7.14E-05 0 0.001214286 3.57E-05 0
f__Cryomorphaceae Rickettsiales + Others 0 0 0 0 0.001571429 0
g__Flavobacterium Rickettsiales + Others 0 0 0 0 0.000321429 0.0015
g__Bacillus Rickettsiales + Others 0 0 3.57E-05 0 0.03175 0.001535714
f__Gemellaceae Rickettsiales + Others 0.000428571 0 0 3.57E-05 0 0
g__Lactobacillus Rickettsiales + Others 7.14E-05 0.000178571 0.000678571 3.57E-05 0.008178571 0.013892857
g__Lactococcus Rickettsiales + Others 0.001142857 0 0 0 0 0
g__Streptococcus Rickettsiales + Others 0.00075 0.001464286 0.004107143 0.001857143 0.000357143 0.001714286
f__Peptostreptococcaceae Rickettsiales + Others 0.000892857 0.000321429 0 0.000464286 0 0
f__Ruminococcaceae Rickettsiales + Others 0 0 0 0.000642857 0 0
g__Anaerococcus Rickettsiales + Others 0 0 0.001857143 0.000142857 3.57E-05 0
c__Gemm-1 Rickettsiales + Others 0 0 0 0.0005 0 0
g__Nitrospira Rickettsiales + Others 0 0 0.004035714 0 0 0
o__Phycisphaerales Rickettsiales + Others 0 0 0 0 0.002285714 0.000142857
f__Pirellulaceae Rickettsiales + Others 0.000714286 0 0 0 0 0
c__Alphaproteobacteria Rickettsiales + Others 0.000642857 0.001107143 0 0.000357143 0 0
g__Bradyrhizobium Rickettsiales + Others 0 0 0 0.000392857 0.001357143 0.002285714
f__Hyphomicrobiaceae Rickettsiales + Others 0 0 0 0 0 0.007285714
f__Rhodobacteraceae Rickettsiales + Others 0.00075 0.000607143 0.006535714 0.001928571 0 0
f__Rhodospirillaceae Rickettsiales + Others 0 0 0 3.57E-05 0.000928571 3.57E-05
o__Rickettsiales Rickettsiales + Others 0.992785714 0.995 0.967964286 0.988285714 0.82575 0.950607143
f__Erythrobacteraceae Rickettsiales + Others 0 0 0 0 0.00025 0.002107143
f__Comamonadaceae Rickettsiales + Others 0 0.000214286 0.002321429 0.000392857 0 0.000714286
g__Paucibacter Rickettsiales + Others 3.57E-05 0 0.003071429 0.000178571 0.000321429 0.000964286
f__Oxalobacteraceae Rickettsiales + Others 0 0 0.000142857 3.57E-05 0.001035714 7.14E-05
o__Myxococcales Rickettsiales + Others 0 0.000178571 0.000107143 0.000535714 0.001178571 0.000107143
o__Campylobacterales Rickettsiales + Others 3.57E-05 7.14E-05 0.000571429 0.00075 0.080357143 0.003321429
f__Enterobacteriaceae Rickettsiales + Others 0 0 0.0005 0 0 0
g__Serratia Rickettsiales + Others 0 0.000142857 0.003535714 0 0 0
g__Haemophilus Rickettsiales + Others 0.0015 0.00025 0 0.001142857 3.57E-05 0.006642857
g__Acinetobacter Rickettsiales + Others 0.000142857 0 0.002035714 0.000214286 0.042857143 0.006785714
f__Pseudomonadaceae Rickettsiales + Others 0 0 0.000535714 0 0 0
g__Pseudomonas Rickettsiales + Others 0 0 0.001571429 0 0 0
g__DA101 Rickettsiales + Others 0 0 0 0.000571429 0 0
g__Corynebacterium Others 0.004950495 0.007142857 0.010033445 0.021341463 0.00081984 0.005061461
f__Micrococcaceae Others 0 0 0 0 0.0030744 0
g__Mycobacterium Others 0.004950495 0 0 0.00304878 0.004099201 0.000723066
g__Porphyromonas Others 0.004950495 0.071428571 0.002229654 0 0 0
g__Prevotella Others 0 0.014285714 0 0.103658537 0.00020496 0
f__Cryomorphaceae Others 0 0 0 0 0.009018241 0
g__Flavobacterium Others 0 0 0 0 0.00184464 0.030368764
g__Bacillus Others 0 0 0.001114827 0 0.182209469 0.031091829
f__Gemellaceae Others 0.059405941 0 0 0.00304878 0 0
g__Lactobacillus Others 0.00990099 0.035714286 0.021181717 0.00304878 0.046935848 0.281272596
g__Lactococcus Others 0.158415842 0 0 0 0 0
g__Streptococcus Others 0.103960396 0.292857143 0.128205128 0.158536585 0.0020496 0.034707158
f__Peptostreptococcaceae Others 0.123762376 0.064285714 0 0.039634146 0 0
f__Ruminococcaceae Others 0 0 0 0.054878049 0 0
g__Anaerococcus Others 0 0 0.057971014 0.012195122 0.00020496 0
c__Gemm-1 Others 0 0 0 0.042682927 0 0
g__Nitrospira Others 0 0 0.125975474 0 0 0
o__Phycisphaerales Others 0 0 0 0 0.013117442 0.002892263
f__Pirellulaceae Others 0.099009901 0 0 0 0 0
c__Alphaproteobacteria Others 0.089108911 0.221428571 0 0.030487805 0 0
g__Bradyrhizobium Others 0 0 0 0.033536585 0.007788481 0.046276211
f__Hyphomicrobiaceae Others 0 0 0 0 0 0.147505423
f__Rhodobacteraceae Others 0.103960396 0.121428571 0.204013378 0.164634146 0 0
f__Rhodospirillaceae Others 0 0 0 0.00304878 0.005328961 0.000723066
f__Erythrobacteraceae Others 0 0 0 0 0.00143472 0.042660882
f__Comamonadaceae Others 0 0.042857143 0.072463768 0.033536585 0 0.014461316
g__Paucibacter Others 0.004950495 0 0.095875139 0.015243902 0.00184464 0.019522777
f__Oxalobacteraceae Others 0 0 0.004459309 0.00304878 0.005943841 0.001446132
o__Myxococcales Others 0 0.035714286 0.003344482 0.045731707 0.006763681 0.002169197
o__Campylobacterales Others 0.004950495 0.014285714 0.017837235 0.06402439 0.461160074 0.067245119
f__Enterobacteriaceae Others 0 0 0.015607581 0 0 0
g__Serratia Others 0 0.028571429 0.110367893 0 0 0
g__Haemophilus Others 0.207920792 0.05 0 0.097560976 0.00020496 0.134490239
g__Acinetobacter Others 0.01980198 0 0.063545151 0.018292683 0.245952039 0.137382502
f__Pseudomonadaceae Others 0 0 0.016722408 0 0 0
g__Pseudomonas Others 0 0 0.049052397 0 0 0
g__DA101 Others 0 0 0 0.048780488 0 0
Computing file changes ...