https://github.com/ctlab/phantasus
Revision b5e2b59d38081b5adff5954fa5bfb01d3ff6fa01 authored by Maksim Kleverov on 05 September 2023, 17:59:51 UTC, committed by Maksim Kleverov on 05 September 2023, 17:59:51 UTC
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Tip revision: b5e2b59d38081b5adff5954fa5bfb01d3ff6fa01 authored by Maksim Kleverov on 05 September 2023, 17:59:51 UTC
annotdb setup working
Tip revision: b5e2b59
NAMESPACE
# Generated by roxygen2: do not edit by hand

export(generatePreloadedSession)
export(getES)
export(getGDS)
export(getGSE)
export(read.gct)
export(reparseCachedESs)
export(servePhantasus)
export(write.gct)
import(Biobase)
import(GEOquery)
import(Rook)
import(ccaPP)
import(data.table)
import(edgeR)
import(ggplot2)
import(grid)
import(gtable)
import(htmltools)
import(httpuv)
import(jsonlite)
import(limma)
import(opencpu)
import(rhdf5)
import(stats)
import(svglite)
importFrom(AnnotationDbi,columns)
importFrom(AnnotationDbi,keys)
importFrom(AnnotationDbi,loadDb)
importFrom(AnnotationDbi,mapIds)
importFrom(AnnotationDbi,species)
importFrom(fgsea,fgseaMultilevel)
importFrom(fgsea,plotEnrichment)
importFrom(ggplot2,ggtitle)
importFrom(grDevices,colorRampPalette)
importFrom(grDevices,dev.off)
importFrom(grDevices,svg)
importFrom(methods,new)
importFrom(parallel,makeCluster)
importFrom(parallel,stopCluster)
importFrom(utils,download.file)
importFrom(utils,getFromNamespace)
importFrom(utils,head)
importFrom(utils,object.size)
importFrom(utils,read.table)
importFrom(utils,tail)
importFrom(utils,write.table)
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