https://github.com/cran/RandomFields
Revision bc905e7488db66af4d6b0b9b1c2badc6e09fefa2 authored by Martin Schlather on 28 January 2015, 00:00:00 UTC, committed by Gabor Csardi on 28 January 2015, 00:00:00 UTC
1 parent 091cb3f
Tip revision: bc905e7488db66af4d6b0b9b1c2badc6e09fefa2 authored by Martin Schlather on 28 January 2015, 00:00:00 UTC
version 3.0.60
version 3.0.60
Tip revision: bc905e7
RMfix.Rd
\name{RMfixcov}
\alias{RMfixcov}
\alias{RMfixcov}
\title{Fixed Covariance Matrix}
\description{
\command{\link{RMfixcov}} is a user-defined covariance according to
the given covariance matrix, multiplied with \code{var}
}
\usage{
RMfixcov(M, vdim, element, var)
}
\arguments{
\item{M}{a numerical matrix defining the user-defined covariance for a
random field; The matrix should be positive definite, symmetric and
its dimension should be equal to the length of observation or
simulation vector.}
\item{vdim}{an integer value; defining the response dimension (for details see \command{\link{RFgetModelNames}}).}
\item{element}{integer. If a list of several matrices is given then
\code{element} chooses the one that should currently be
used. Default: 0}
\item{var}{variance, i.e. factor multiplied to the data, which can be
estimated through ML
}
}
\details{
Note, this is not a covariance model for arbitrary locations, the
covariance is fixed and user-defined by a given matrix corresponding
to the locations.
In particular, it is used in \command{\link{RFfit}} to define neighbour or network structure in the data.
}
\value{
\command{\link{RMfixcov}} returns an object of class \code{\link[=RMmodel-class]{RMmodel}}
}
\references{
\itemize{
\item Ober, U., Ayroles, J.F., Stone, E.A., Richards, S., Zhu, D., Gibbs, R.A., Stricker, C., Gianola, D., Schlather, M., Mackay, T.F.C., Simianer, H. (2012): \emph{Using Whole Genome Sequence Data to Predict Quantitative Trait Phenotypes in Drosophila melanogaster}. PLoS Genet 8(5): e1002685.
}
}
\author{Martin Schlather, \email{schlather@math.uni-mannheim.de}
}
\seealso{
\command{\link{RMmodel}},
\command{\link{RFsimulate}},
\command{\link{RFfit}}.
}
\keyword{spatial}
\keyword{models}
\examples{
## to do
\dontshow{FinalizeExample()}
}
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