https://github.com/ctlab/phantasus
Revision c191786ca3d9000762e5130e6815613d3ad7aed1 authored by Maksim Kleverov on 07 November 2023, 19:58:18 UTC, committed by Maksim Kleverov on 07 November 2023, 19:58:18 UTC
Tip revision: c191786ca3d9000762e5130e6815613d3ad7aed1 authored by Maksim Kleverov on 07 November 2023, 19:58:18 UTC
Get version with bugfixes
Get version with bugfixes
Tip revision: c191786
NAMESPACE
# Generated by roxygen2: do not edit by hand
export(generatePreloadedSession)
export(getES)
export(getGDS)
export(getGSE)
export(getPhantasusConf)
export(read.gct)
export(reparseCachedESs)
export(servePhantasus)
export(setupPhantasus)
export(write.gct)
import(Biobase)
import(GEOquery)
import(Rook)
import(ccaPP)
import(data.table)
import(edgeR)
import(ggplot2)
import(grid)
import(gtable)
import(htmltools)
import(httpuv)
import(jsonlite)
import(limma)
import(opencpu)
import(rhdf5)
import(stats)
import(svglite)
importFrom(AnnotationDbi,columns)
importFrom(AnnotationDbi,keys)
importFrom(AnnotationDbi,loadDb)
importFrom(AnnotationDbi,mapIds)
importFrom(AnnotationDbi,species)
importFrom(fgsea,fgseaMultilevel)
importFrom(fgsea,plotEnrichment)
importFrom(ggplot2,ggtitle)
importFrom(grDevices,colorRampPalette)
importFrom(grDevices,dev.off)
importFrom(grDevices,svg)
importFrom(methods,new)
importFrom(parallel,makeCluster)
importFrom(parallel,stopCluster)
importFrom(utils,download.file)
importFrom(utils,getFromNamespace)
importFrom(utils,head)
importFrom(utils,object.size)
importFrom(utils,read.table)
importFrom(utils,tail)
importFrom(utils,write.table)
Computing file changes ...