https://github.com/ctlab/phantasus
Revision cc8a30d8bcabbd2704338d01ef03d299156b7254 authored by Vladislav Kamenev on 21 June 2019, 13:10:10 UTC, committed by Vladislav Kamenev on 21 June 2019, 13:10:10 UTC
1 parent c81f40f
Tip revision: cc8a30d8bcabbd2704338d01ef03d299156b7254 authored by Vladislav Kamenev on 21 June 2019, 13:10:10 UTC
Omit unannotated removes NA aswell
Omit unannotated removes NA aswell
Tip revision: cc8a30d
NAMESPACE
# Generated by roxygen2: do not edit by hand
export(getES)
export(getGDS)
export(getGSE)
export(read.gct)
export(reparseCachedESs)
export(servePhantasus)
export(write.gct)
import(Biobase)
import(GEOquery)
import(Rook)
import(ccaPP)
import(ggplot2)
import(grid)
import(gtable)
import(htmltools)
import(httpuv)
import(jsonlite)
import(limma)
import(opencpu)
import(rhdf5)
import(stats)
import(svglite)
importFrom(AnnotationDbi,columns)
importFrom(AnnotationDbi,keys)
importFrom(AnnotationDbi,loadDb)
importFrom(AnnotationDbi,mapIds)
importFrom(AnnotationDbi,species)
importFrom(fgsea,fgseaMultilevel)
importFrom(fgsea,plotEnrichment)
importFrom(ggplot2,ggtitle)
importFrom(grDevices,colorRampPalette)
importFrom(grDevices,dev.off)
importFrom(grDevices,svg)
importFrom(methods,new)
importFrom(parallel,makeCluster)
importFrom(parallel,stopCluster)
importFrom(utils,download.file)
importFrom(utils,getFromNamespace)
importFrom(utils,head)
importFrom(utils,read.table)
importFrom(utils,tail)
importFrom(utils,write.table)
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