https://github.com/ctlab/phantasus
Revision d2a4ccf70689567008754cfd4097b86a1f796b8d authored by Alexey Sergushichev on 18 March 2020, 17:40:49 UTC, committed by Alexey Sergushichev on 18 March 2020, 17:40:49 UTC
1 parent 4d9ce74
Tip revision: d2a4ccf70689567008754cfd4097b86a1f796b8d authored by Alexey Sergushichev on 18 March 2020, 17:40:49 UTC
fix error in loadGSE due to stringAsFactors=FALSE
fix error in loadGSE due to stringAsFactors=FALSE
Tip revision: d2a4ccf
NAMESPACE
# Generated by roxygen2: do not edit by hand
export(getES)
export(getGDS)
export(getGSE)
export(read.gct)
export(reparseCachedESs)
export(servePhantasus)
export(write.gct)
import(Biobase)
import(GEOquery)
import(Rook)
import(ccaPP)
import(ggplot2)
import(grid)
import(gtable)
import(htmltools)
import(httpuv)
import(jsonlite)
import(limma)
import(opencpu)
import(rhdf5)
import(stats)
import(svglite)
importFrom(AnnotationDbi,columns)
importFrom(AnnotationDbi,keys)
importFrom(AnnotationDbi,loadDb)
importFrom(AnnotationDbi,mapIds)
importFrom(AnnotationDbi,species)
importFrom(fgsea,fgseaMultilevel)
importFrom(fgsea,plotEnrichment)
importFrom(ggplot2,ggtitle)
importFrom(grDevices,colorRampPalette)
importFrom(grDevices,dev.off)
importFrom(grDevices,svg)
importFrom(methods,new)
importFrom(parallel,makeCluster)
importFrom(parallel,stopCluster)
importFrom(utils,download.file)
importFrom(utils,getFromNamespace)
importFrom(utils,head)
importFrom(utils,read.table)
importFrom(utils,tail)
importFrom(utils,write.table)
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