https://github.com/geodynamics/citcoms
Revision e15117c1852bdcab6fb0f22c068a47e63455c245 authored by Thorsten Becker on 27 February 2008, 07:42:44 UTC, committed by Thorsten Becker on 27 February 2008, 07:42:44 UTC
needs more testing, but it would be good to have the framework in
place before new additions are made. Also, age control is not yet
implemented, but will be soon.


1 parent 332d337
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Tip revision: e15117c1852bdcab6fb0f22c068a47e63455c245 authored by Thorsten Becker on 27 February 2008, 07:42:44 UTC
Built surface velocity BC support via Netcdf grd files back in. This
Tip revision: e15117c
batchsurf.py
#!/usr/bin/env python
#
# ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
#
#<LicenseText>
#
# CitcomS.py by Eh Tan, Eun-seo Choi, and Pururav Thoutireddy.
# Copyright (C) 2002-2005, California Institute of Technology.
#
# This program is free software; you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation; either version 2 of the License, or
# (at your option) any later version.
#
# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
# GNU General Public License for more details.
#
# You should have received a copy of the GNU General Public License
# along with this program; if not, write to the Free Software
# Foundation, Inc., 59 Temple Place, Suite 330, Boston, MA  02111-1307  USA
#
#</LicenseText>
#
# ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
#

'''
Combine Citcom Surface Data

usage: batchsurf.py machinefile modeldir modelname timestep nodex nodey nodez n_surf_proc nprocx nprocy nprocz
'''

if __name__ == '__main__':

    import sys, os

    if not len(sys.argv) == 12:
        print __doc__
        sys.exit(1)

    machinefile = sys.argv[1]
    modeldir = sys.argv[2]
    modelname = sys.argv[3]
    timestep = int(sys.argv[4])
    nodex = int(sys.argv[5])
    nodey = int(sys.argv[6])
    nodez = int(sys.argv[7])
    ncap = int(sys.argv[8])
    nprocx = int(sys.argv[9])
    nprocy = int(sys.argv[10])
    nprocz = int(sys.argv[11])

    # generate a string of machine names
    from batchcombine import machinefile2nodes
    totalnodes = nprocx * nprocy * nprocz * ncap
    nodes = machinefile2nodes(machinefile, totalnodes)

    # extract machines at the surface
    tmp = nodes.split()[(nprocz-1)::nprocz]
    nodes = ' '.join(tmp)

    # get coordinate, if necessary
    coord_exist = True
    for n in range(totalnodes):
        coord_file = '%(modelname)s.coord.%(n)d' % vars()
        coord_exist &= os.path.exists(coord_file)

    if not coord_exist:
        cmd = 'getcoord.sh %(modeldir)s %(modelname)s %(nprocz)d %(nodes)s' % vars()
        print cmd
        os.system(cmd)

    # get surf data
    cmd = 'getsurf.sh %(modeldir)s %(modelname)s %(timestep)d %(nprocz)d %(nodes)s' % vars()
    print cmd
    os.system(cmd)

    # combine
    cmd = 'combinesurf.py %(modelname)s %(timestep)d %(nodex)d %(nodey)d %(nodez)d %(ncap)d %(nprocx)d %(nprocy)d %(nprocz)d' % vars()
    print cmd
    os.system(cmd)

    # delete modelname.surf.* files, only if the originial data is not
    # stored in the current directory, ie. if velofile exists
    velofile = '%(modelname)s.velo.0.%(timestep)d' % vars()
    if not os.path.exists(velofile):
        cmd = 'rm %(modelname)s.surf.[0-9]*.%(timestep)d' % vars()
        print cmd
        os.system(cmd)

    # create .general file
    cmd = 'dxgeneralsurf.sh %(modelname)s.surf[0-9]*.%(timestep)d' % vars()
    print cmd
    os.system(cmd)


# version
# $Id$

# End of file
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