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https://github.com/fenderglass/Ragout
22 June 2021, 01:28:21 UTC
Revision e26a6e892338a6de4fae6b5887e48cfac9728fad authored by fenderglass on 21 June 2014, 22:47:47 UTC, committed by fenderglass on 21 June 2014, 22:47:47 UTC 
Makefiles
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Tip revision: e26a6e892338a6de4fae6b5887e48cfac9728fad authored by fenderglass on 21 June 2014, 22:47:47 UTC
Makefiles
Tip revision: e26a6e8
Makefile 
OVLP_DIR := ragout/overlap/cpp_impl/
M2S_DIR := ragout/maf2synteny/cpp_impl/
BIN_DIR := $(shell pwd)/lib/

UNAME := $(shell uname -s)
IS_CLANG := $(shell which clang++ 1>&2 2>/dev/null; echo $$?)
IS_GCC := $(shell which g++ 1>&2 2>/dev/null; echo $$?)

ifeq (${IS_CLANG},0)
	CXX := clang++ -std=c++11

	ifeq ($(UNAME),Darwin) #for macos
		CXX += -stdlib=libc++
	endif

else ifeq (${IS_GCC},0)
	CXX := g++ -std=c++11

else
err:
	$(error Neither gcc nor clang compilers were detected.)
endif

export CXX
export BIN_DIR

.PHONY: all overlap dependencies clean maf2synteny

all: overlap maf2synteny

overlap:
	make -C ${OVLP_DIR} all

maf2synteny:
	make -C ${M2S_DIR} all

dependencies:
	scripts/install-sibelia.py

clean:
	make -C ${OVLP_DIR} clean
	make -C ${M2S_DIR} clean
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