swh:1:snp:e6d42e6731ce66e3c09de07ac49964c03139e990
Tip revision: 26b818c8be2be41dd673d938b403c5c7562635de authored by Travis CI on 28 November 2019, 13:55:12 UTC
Deploy code docs to GitHub Pages Travis build: 305
Deploy code docs to GitHub Pages Travis build: 305
Tip revision: 26b818c
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<div class="title">KWUtil.h</div> </div>
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<div class="contents">
<div class="fragment"><div class="line"><a name="l00001"></a><span class="lineno"> 1</span> <span class="comment">//</span></div>
<div class="line"><a name="l00002"></a><span class="lineno"> 2</span> <span class="comment">// KWUtil.h</span></div>
<div class="line"><a name="l00003"></a><span class="lineno"> 3</span> <span class="comment">// TomatoLib</span></div>
<div class="line"><a name="l00004"></a><span class="lineno"> 4</span> <span class="comment">//</span></div>
<div class="line"><a name="l00005"></a><span class="lineno"> 5</span> <span class="comment">// Created by Konrad Werys on 12/8/16.</span></div>
<div class="line"><a name="l00006"></a><span class="lineno"> 6</span> <span class="comment">// Copyright © 2016 Konrad Werys. All rights reserved.</span></div>
<div class="line"><a name="l00007"></a><span class="lineno"> 7</span> <span class="comment">//</span></div>
<div class="line"><a name="l00008"></a><span class="lineno"> 8</span> </div>
<div class="line"><a name="l00009"></a><span class="lineno"> 9</span> <span class="preprocessor">#ifndef KWUtil_h</span></div>
<div class="line"><a name="l00010"></a><span class="lineno"> 10</span> <span class="preprocessor"></span><span class="preprocessor">#define KWUtil_h</span></div>
<div class="line"><a name="l00011"></a><span class="lineno"> 11</span> <span class="preprocessor"></span></div>
<div class="line"><a name="l00012"></a><span class="lineno"> 12</span> <span class="comment">//#ifndef EXIT_SUCCESS</span></div>
<div class="line"><a name="l00013"></a><span class="lineno"> 13</span> <span class="comment">//#define EXIT_SUCCESS 0</span></div>
<div class="line"><a name="l00014"></a><span class="lineno"> 14</span> <span class="comment">//#endif</span></div>
<div class="line"><a name="l00015"></a><span class="lineno"> 15</span> <span class="comment">//</span></div>
<div class="line"><a name="l00016"></a><span class="lineno"> 16</span> <span class="comment">//#ifndef EXIT_FAILURE</span></div>
<div class="line"><a name="l00017"></a><span class="lineno"> 17</span> <span class="comment">//#define EXIT_FAILURE 1</span></div>
<div class="line"><a name="l00018"></a><span class="lineno"> 18</span> <span class="comment">//#endif</span></div>
<div class="line"><a name="l00019"></a><span class="lineno"> 19</span> </div>
<div class="line"><a name="l00020"></a><span class="lineno"> 20</span> <span class="preprocessor">#include <iostream></span></div>
<div class="line"><a name="l00021"></a><span class="lineno"> 21</span> <span class="preprocessor">#include <iomanip></span></div>
<div class="line"><a name="l00022"></a><span class="lineno"> 22</span> <span class="preprocessor">#include <cstdarg></span></div>
<div class="line"><a name="l00023"></a><span class="lineno"> 23</span> <span class="preprocessor">#include <cmath></span></div>
<div class="line"><a name="l00024"></a><span class="lineno"> 24</span> <span class="preprocessor">#include <vector></span></div>
<div class="line"><a name="l00025"></a><span class="lineno"> 25</span> <span class="preprocessor">#include <string></span></div>
<div class="line"><a name="l00026"></a><span class="lineno"> 26</span> <span class="preprocessor">#include <sstream></span></div>
<div class="line"><a name="l00027"></a><span class="lineno"> 27</span> <span class="preprocessor">#include <stdexcept></span></div>
<div class="line"><a name="l00028"></a><span class="lineno"> 28</span> <span class="preprocessor">#include <sys/stat.h></span></div>
<div class="line"><a name="l00029"></a><span class="lineno"> 29</span> <span class="preprocessor">#include <fstream></span></div>
<div class="line"><a name="l00030"></a><span class="lineno"> 30</span> <span class="preprocessor">#include <limits></span></div>
<div class="line"><a name="l00031"></a><span class="lineno"> 31</span> </div>
<div class="line"><a name="l00032"></a><span class="lineno"> 32</span> <span class="comment">// MS stuff problems</span></div>
<div class="line"><a name="l00033"></a><span class="lineno"> 33</span> <span class="comment">// https://stackoverflow.com/questions/26065359/m-pi-flagged-as-undeclared-identifier</span></div>
<div class="line"><a name="l00034"></a><span class="lineno"> 34</span> <span class="preprocessor">#ifndef M_PI</span></div>
<div class="line"><a name="l00035"></a><span class="lineno"> 35</span> <span class="preprocessor"></span><span class="preprocessor">#define M_PI 3.14159265358979323846</span></div>
<div class="line"><a name="l00036"></a><span class="lineno"> 36</span> <span class="preprocessor"></span><span class="preprocessor">#endif</span></div>
<div class="line"><a name="l00037"></a><span class="lineno"> 37</span> <span class="preprocessor"></span></div>
<div class="line"><a name="l00038"></a><span class="lineno"> 38</span> </div>
<div class="line"><a name="l00039"></a><span class="lineno"><a class="line" href="class_k_w_util.html"> 39</a></span> <span class="keyword">class </span><a class="code" href="class_k_w_util.html">KWUtil</a>{</div>
<div class="line"><a name="l00040"></a><span class="lineno"> 40</span> <span class="keyword">public</span>:</div>
<div class="line"><a name="l00041"></a><span class="lineno"> 41</span> </div>
<div class="line"><a name="l00042"></a><span class="lineno"> 42</span>  <span class="keyword">template</span>< <span class="keyword">typename</span> TYPE ></div>
<div class="line"><a name="l00043"></a><span class="lineno"> 43</span>  <span class="keyword">static</span> <span class="keywordtype">void</span> printKW(<span class="keywordtype">bool</span> doPrint, <span class="keywordtype">char</span>* fmt, ...);</div>
<div class="line"><a name="l00044"></a><span class="lineno"> 44</span> </div>
<div class="line"><a name="l00045"></a><span class="lineno"> 45</span>  <span class="comment">/***********************/</span></div>
<div class="line"><a name="l00046"></a><span class="lineno"> 46</span>  <span class="comment">/* copyArrayToArray */</span></div>
<div class="line"><a name="l00047"></a><span class="lineno"> 47</span>  <span class="comment">/***********************/</span></div>
<div class="line"><a name="l00048"></a><span class="lineno"> 48</span>  <span class="keyword">template</span>< <span class="keyword">typename</span> TYPE1, <span class="keyword">typename</span> TYPE2 ></div>
<div class="line"><a name="l00049"></a><span class="lineno"> 49</span>  <span class="keyword">static</span> <span class="keywordtype">void</span> copyArrayToArray(<span class="keywordtype">int</span> nSamples, TYPE1 *arrayTo, <span class="keyword">const</span> TYPE2 *arrayFrom);</div>
<div class="line"><a name="l00050"></a><span class="lineno"> 50</span> </div>
<div class="line"><a name="l00051"></a><span class="lineno"> 51</span>  <span class="comment">/***********************/</span></div>
<div class="line"><a name="l00052"></a><span class="lineno"> 52</span>  <span class="comment">/* printVector */</span></div>
<div class="line"><a name="l00053"></a><span class="lineno"> 53</span>  <span class="comment">/***********************/</span></div>
<div class="line"><a name="l00054"></a><span class="lineno"> 54</span> </div>
<div class="line"><a name="l00060"></a><span class="lineno"> 60</span>  <span class="keyword">template</span><<span class="keyword">typename</span> TYPE></div>
<div class="line"><a name="l00061"></a><span class="lineno"> 61</span>  <span class="keyword">static</span> <span class="keywordtype">void</span> <a class="code" href="class_k_w_util.html#acc956bb7cbedc39fbca11a6414b66dac">printVector</a>(<span class="keyword">const</span> std::string& name, <span class="keyword">const</span> std::vector<TYPE> vector);</div>
<div class="line"><a name="l00062"></a><span class="lineno"> 62</span> </div>
<div class="line"><a name="l00069"></a><span class="lineno"> 69</span>  <span class="keyword">template</span><<span class="keyword">typename</span> TYPE></div>
<div class="line"><a name="l00070"></a><span class="lineno"> 70</span>  <span class="keyword">static</span> <span class="keywordtype">void</span> <a class="code" href="class_k_w_util.html#aec00dd2420ac8d850284db70c71c1c16">printVectorNewline</a>(<span class="keyword">const</span> std::string &name, <span class="keyword">const</span> std::vector<TYPE> vector);</div>
<div class="line"><a name="l00071"></a><span class="lineno"> 71</span> </div>
<div class="line"><a name="l00072"></a><span class="lineno"> 72</span>  <span class="comment">/***********************/</span></div>
<div class="line"><a name="l00073"></a><span class="lineno"> 73</span>  <span class="comment">/* printArray 1D */</span></div>
<div class="line"><a name="l00074"></a><span class="lineno"> 74</span>  <span class="comment">/***********************/</span></div>
<div class="line"><a name="l00075"></a><span class="lineno"> 75</span>  <span class="keyword">template</span>< <span class="keyword">typename</span> TYPE ></div>
<div class="line"><a name="l00076"></a><span class="lineno"> 76</span>  <span class="keyword">static</span> <span class="keywordtype">void</span> printArray(<span class="keywordtype">int</span> nSamples, <span class="keyword">const</span> TYPE *myarray);</div>
<div class="line"><a name="l00077"></a><span class="lineno"> 77</span> </div>
<div class="line"><a name="l00078"></a><span class="lineno"> 78</span>  <span class="keyword">template</span>< <span class="keyword">typename</span> TYPE ></div>
<div class="line"><a name="l00079"></a><span class="lineno"> 79</span>  <span class="keyword">static</span> <span class="keywordtype">void</span> printArray(<span class="keywordtype">int</span> nSamples, <span class="keyword">const</span> TYPE *myarray, <span class="keywordtype">int</span> width);</div>
<div class="line"><a name="l00080"></a><span class="lineno"> 80</span> </div>
<div class="line"><a name="l00081"></a><span class="lineno"> 81</span>  <span class="keyword">template</span>< <span class="keyword">typename</span> TYPE ></div>
<div class="line"><a name="l00082"></a><span class="lineno"> 82</span>  <span class="keyword">static</span> <span class="keywordtype">void</span> printArray(<span class="keywordtype">int</span> nSamples, <span class="keyword">const</span> TYPE *myarray, <span class="keywordtype">char</span>* text);</div>
<div class="line"><a name="l00083"></a><span class="lineno"> 83</span> </div>
<div class="line"><a name="l00084"></a><span class="lineno"> 84</span>  <span class="keyword">template</span>< <span class="keyword">typename</span> TYPE ></div>
<div class="line"><a name="l00085"></a><span class="lineno"> 85</span>  <span class="keyword">static</span> <span class="keywordtype">void</span> printArray(<span class="keywordtype">bool</span> doPrint, <span class="keywordtype">int</span> nSamples, <span class="keyword">const</span> TYPE *myarray);</div>
<div class="line"><a name="l00086"></a><span class="lineno"> 86</span> </div>
<div class="line"><a name="l00087"></a><span class="lineno"> 87</span>  <span class="keyword">template</span>< <span class="keyword">typename</span> TYPE ></div>
<div class="line"><a name="l00088"></a><span class="lineno"> 88</span>  <span class="keyword">static</span> <span class="keywordtype">void</span> printArray(<span class="keywordtype">bool</span> doPrint, <span class="keywordtype">int</span> nSamples, <span class="keyword">const</span> TYPE *myarray, <span class="keywordtype">char</span>* text);</div>
<div class="line"><a name="l00089"></a><span class="lineno"> 89</span> </div>
<div class="line"><a name="l00090"></a><span class="lineno"> 90</span>  <span class="comment">/***********************/</span></div>
<div class="line"><a name="l00091"></a><span class="lineno"> 91</span>  <span class="comment">/* printArray 2D */</span></div>
<div class="line"><a name="l00092"></a><span class="lineno"> 92</span>  <span class="comment">/***********************/</span></div>
<div class="line"><a name="l00093"></a><span class="lineno"> 93</span>  <span class="keyword">template</span>< <span class="keyword">typename</span> TYPE ></div>
<div class="line"><a name="l00094"></a><span class="lineno"> 94</span>  <span class="keyword">static</span> <span class="keywordtype">void</span> printArray2D(<span class="keywordtype">int</span> nRows, <span class="keywordtype">int</span> nCols, TYPE **myarray);</div>
<div class="line"><a name="l00095"></a><span class="lineno"> 95</span> </div>
<div class="line"><a name="l00096"></a><span class="lineno"> 96</span>  <span class="keyword">template</span>< <span class="keyword">typename</span> TYPE ></div>
<div class="line"><a name="l00097"></a><span class="lineno"> 97</span>  <span class="keyword">static</span> <span class="keywordtype">void</span> printArray2D(<span class="keywordtype">int</span> nRows, <span class="keywordtype">int</span> nCols, TYPE **myarray, <span class="keywordtype">char</span>* text);</div>
<div class="line"><a name="l00098"></a><span class="lineno"> 98</span> </div>
<div class="line"><a name="l00099"></a><span class="lineno"> 99</span>  <span class="keyword">template</span>< <span class="keyword">typename</span> TYPE ></div>
<div class="line"><a name="l00100"></a><span class="lineno"> 100</span>  <span class="keyword">static</span> <span class="keywordtype">void</span> printArray2D(<span class="keywordtype">bool</span> doPrint, <span class="keywordtype">int</span> nRows, <span class="keywordtype">int</span> nCols, TYPE **myarray);</div>
<div class="line"><a name="l00101"></a><span class="lineno"> 101</span> </div>
<div class="line"><a name="l00102"></a><span class="lineno"> 102</span>  <span class="keyword">template</span>< <span class="keyword">typename</span> TYPE ></div>
<div class="line"><a name="l00103"></a><span class="lineno"> 103</span>  <span class="keyword">static</span> <span class="keywordtype">void</span> printArray2D(<span class="keywordtype">bool</span> doPrint, <span class="keywordtype">int</span> nRows, <span class="keywordtype">int</span> nCols, TYPE **myarray, <span class="keywordtype">char</span>* text);</div>
<div class="line"><a name="l00104"></a><span class="lineno"> 104</span> </div>
<div class="line"><a name="l00105"></a><span class="lineno"> 105</span>  <span class="comment">/***********************/</span></div>
<div class="line"><a name="l00106"></a><span class="lineno"> 106</span>  <span class="comment">/* printStdVector 1D */</span></div>
<div class="line"><a name="l00107"></a><span class="lineno"> 107</span>  <span class="comment">/***********************/</span></div>
<div class="line"><a name="l00108"></a><span class="lineno"> 108</span> </div>
<div class="line"><a name="l00109"></a><span class="lineno"> 109</span>  <span class="keyword">template</span>< <span class="keyword">typename</span> TYPE ></div>
<div class="line"><a name="l00110"></a><span class="lineno"> 110</span>  <span class="keyword">static</span> <span class="keywordtype">void</span> printStdVector(<span class="keyword">const</span> std::vector<TYPE> myvector);</div>
<div class="line"><a name="l00111"></a><span class="lineno"> 111</span> </div>
<div class="line"><a name="l00112"></a><span class="lineno"> 112</span>  <span class="keyword">template</span>< <span class="keyword">typename</span> TYPE ></div>
<div class="line"><a name="l00113"></a><span class="lineno"> 113</span>  <span class="keyword">static</span> <span class="keywordtype">void</span> printStdVector(<span class="keyword">const</span> std::vector<TYPE> myvector, <span class="keywordtype">char</span>* text);</div>
<div class="line"><a name="l00114"></a><span class="lineno"> 114</span> </div>
<div class="line"><a name="l00115"></a><span class="lineno"> 115</span>  <span class="keyword">template</span>< <span class="keyword">typename</span> TYPE ></div>
<div class="line"><a name="l00116"></a><span class="lineno"> 116</span>  <span class="keyword">static</span> <span class="keywordtype">void</span> printStdVector(<span class="keywordtype">bool</span> doPrint, <span class="keyword">const</span> std::vector<TYPE> myvector);</div>
<div class="line"><a name="l00117"></a><span class="lineno"> 117</span> </div>
<div class="line"><a name="l00118"></a><span class="lineno"> 118</span>  <span class="keyword">template</span>< <span class="keyword">typename</span> TYPE ></div>
<div class="line"><a name="l00119"></a><span class="lineno"> 119</span>  <span class="keyword">static</span> <span class="keywordtype">void</span> printStdVector(<span class="keywordtype">bool</span> doPrint, <span class="keyword">const</span> std::vector<TYPE> myvector, <span class="keywordtype">char</span>* text);</div>
<div class="line"><a name="l00120"></a><span class="lineno"> 120</span> </div>
<div class="line"><a name="l00121"></a><span class="lineno"> 121</span> </div>
<div class="line"><a name="l00122"></a><span class="lineno"> 122</span>  <span class="comment">/***********************/</span></div>
<div class="line"><a name="l00123"></a><span class="lineno"> 123</span>  <span class="comment">/* calculations */</span></div>
<div class="line"><a name="l00124"></a><span class="lineno"> 124</span>  <span class="comment">/***********************/</span></div>
<div class="line"><a name="l00125"></a><span class="lineno"> 125</span> </div>
<div class="line"><a name="l00126"></a><span class="lineno"> 126</span>  <span class="keyword">template</span>< <span class="keyword">typename</span> TYPE ></div>
<div class="line"><a name="l00127"></a><span class="lineno"> 127</span>  <span class="keyword">static</span> <span class="keywordtype">void</span> swap(TYPE &a, TYPE &b);</div>
<div class="line"><a name="l00128"></a><span class="lineno"> 128</span> </div>
<div class="line"><a name="l00129"></a><span class="lineno"> 129</span>  <span class="keyword">template</span>< <span class="keyword">typename</span> TYPE ></div>
<div class="line"><a name="l00130"></a><span class="lineno"> 130</span>  <span class="keyword">static</span> TYPE max(TYPE a, TYPE b);</div>
<div class="line"><a name="l00131"></a><span class="lineno"> 131</span> </div>
<div class="line"><a name="l00132"></a><span class="lineno"> 132</span>  <span class="keyword">template</span>< <span class="keyword">typename</span> TYPE ></div>
<div class="line"><a name="l00133"></a><span class="lineno"> 133</span>  <span class="keyword">static</span> TYPE min(TYPE a, TYPE b);</div>
<div class="line"><a name="l00134"></a><span class="lineno"> 134</span> </div>
<div class="line"><a name="l00135"></a><span class="lineno"> 135</span>  <span class="keyword">template</span>< <span class="keyword">typename</span> TYPE ></div>
<div class="line"><a name="l00136"></a><span class="lineno"> 136</span>  <span class="keyword">static</span> TYPE calcSumArray(<span class="keywordtype">int</span> nSamples, <span class="keyword">const</span> TYPE *myarray);</div>
<div class="line"><a name="l00137"></a><span class="lineno"> 137</span> </div>
<div class="line"><a name="l00138"></a><span class="lineno"> 138</span>  <span class="keyword">template</span>< <span class="keyword">typename</span> TYPE ></div>
<div class="line"><a name="l00139"></a><span class="lineno"> 139</span>  <span class="keyword">static</span> <span class="keywordtype">double</span> calcMeanArray(<span class="keywordtype">int</span> nSamples, <span class="keyword">const</span> TYPE *myarray);</div>
<div class="line"><a name="l00140"></a><span class="lineno"> 140</span> </div>
<div class="line"><a name="l00141"></a><span class="lineno"> 141</span>  <span class="keyword">template</span>< <span class="keyword">typename</span> TYPE ></div>
<div class="line"><a name="l00142"></a><span class="lineno"> 142</span>  <span class="keyword">static</span> <span class="keywordtype">double</span> calcMedianArray(<span class="keywordtype">int</span> nSamples, <span class="keyword">const</span> TYPE *myarray);</div>
<div class="line"><a name="l00143"></a><span class="lineno"> 143</span> </div>
<div class="line"><a name="l00144"></a><span class="lineno"> 144</span>  <span class="keyword">template</span>< <span class="keyword">typename</span> TYPE ></div>
<div class="line"><a name="l00145"></a><span class="lineno"> 145</span>  <span class="keyword">static</span> <span class="keywordtype">double</span> calcStandardDeviationArray(<span class="keywordtype">int</span> nSamples, <span class="keyword">const</span> TYPE *myarray);</div>
<div class="line"><a name="l00146"></a><span class="lineno"> 146</span> </div>
<div class="line"><a name="l00147"></a><span class="lineno"> 147</span>  <span class="keyword">template</span>< <span class="keyword">typename</span> TYPE ></div>
<div class="line"><a name="l00148"></a><span class="lineno"> 148</span>  <span class="keyword">static</span> <span class="keywordtype">double</span> calcR2ss (<span class="keywordtype">int</span> nSamples, <span class="keyword">const</span> TYPE *fitted, <span class="keyword">const</span> TYPE *ysignal);</div>
<div class="line"><a name="l00149"></a><span class="lineno"> 149</span> </div>
<div class="line"><a name="l00150"></a><span class="lineno"> 150</span>  <span class="keyword">template</span>< <span class="keyword">typename</span> TYPE ></div>
<div class="line"><a name="l00151"></a><span class="lineno"> 151</span>  <span class="keyword">static</span> <span class="keywordtype">double</span> calcR2cor(<span class="keywordtype">int</span> nSamples, <span class="keyword">const</span> TYPE *fitted, <span class="keyword">const</span> TYPE *ysignal);</div>
<div class="line"><a name="l00152"></a><span class="lineno"> 152</span> </div>
<div class="line"><a name="l00153"></a><span class="lineno"> 153</span>  <span class="keyword">template</span>< <span class="keyword">typename</span> TYPE ></div>
<div class="line"><a name="l00154"></a><span class="lineno"> 154</span>  <span class="keyword">static</span> <span class="keywordtype">double</span> SKPLinReg(<span class="keyword">const</span> TYPE *datax, <span class="keyword">const</span> TYPE *datay, <span class="keywordtype">int</span> nSamples, TYPE &rslope, TYPE &roffset);</div>
<div class="line"><a name="l00155"></a><span class="lineno"> 155</span> </div>
<div class="line"><a name="l00156"></a><span class="lineno"> 156</span>  <span class="keyword">template</span>< <span class="keyword">typename</span> TYPE ></div>
<div class="line"><a name="l00157"></a><span class="lineno"> 157</span>  <span class="keyword">static</span> <span class="keywordtype">void</span> SKPsort(<span class="keywordtype">int</span> nSamples, <span class="keyword">const</span> TYPE *myarray, <span class="keywordtype">int</span> *index);</div>
<div class="line"><a name="l00158"></a><span class="lineno"> 158</span> </div>
<div class="line"><a name="l00159"></a><span class="lineno"> 159</span>  <span class="keyword">template</span>< <span class="keyword">typename</span> TYPE ></div>
<div class="line"><a name="l00160"></a><span class="lineno"> 160</span>  <span class="keyword">static</span> <span class="keywordtype">void</span> quickSort(<span class="keywordtype">int</span> nSamples, TYPE *myarray);</div>
<div class="line"><a name="l00161"></a><span class="lineno"> 161</span> </div>
<div class="line"><a name="l00162"></a><span class="lineno"> 162</span>  <span class="keyword">template</span>< <span class="keyword">typename</span> TYPE ></div>
<div class="line"><a name="l00163"></a><span class="lineno"> 163</span>  <span class="keyword">static</span> <span class="keywordtype">void</span> quickSortIndex(<span class="keywordtype">int</span> nSamples, TYPE *myarray, <span class="keywordtype">int</span> *indexArray);</div>
<div class="line"><a name="l00164"></a><span class="lineno"> 164</span> </div>
<div class="line"><a name="l00165"></a><span class="lineno"> 165</span>  <span class="keyword">template</span>< <span class="keyword">typename</span> TYPE ></div>
<div class="line"><a name="l00166"></a><span class="lineno"> 166</span>  <span class="keyword">static</span> TYPE getChiSqrt(TYPE lastFValue, <span class="keywordtype">int</span> nSamples);</div>
<div class="line"><a name="l00167"></a><span class="lineno"> 167</span> </div>
<div class="line"><a name="l00176"></a><span class="lineno"> 176</span>  <span class="keyword">template</span>< <span class="keyword">typename</span> TYPE ></div>
<div class="line"><a name="l00177"></a><span class="lineno"> 177</span>  <span class="keyword">static</span> <span class="keywordtype">int</span> <a class="code" href="class_k_w_util.html#a80504801c382f1ac367bcf0787fb18c2">calcMatrixInverse3x3</a>(<span class="keyword">const</span> TYPE *matrix, TYPE *matrixInverse);</div>
<div class="line"><a name="l00178"></a><span class="lineno"> 178</span> </div>
<div class="line"><a name="l00179"></a><span class="lineno"> 179</span>  <span class="keyword">template</span>< <span class="keyword">typename</span> TYPE ></div>
<div class="line"><a name="l00180"></a><span class="lineno"> 180</span>  <span class="keyword">static</span> TYPE MOLLI_min(TYPE a[], <span class="keywordtype">int</span> n, <span class="keywordtype">int</span> *indm);</div>
<div class="line"><a name="l00181"></a><span class="lineno"> 181</span> </div>
<div class="line"><a name="l00182"></a><span class="lineno"> 182</span>  <span class="keyword">template</span>< <span class="keyword">typename</span> TYPE ></div>
<div class="line"><a name="l00183"></a><span class="lineno"> 183</span>  <span class="keyword">static</span> TYPE MOLLI_max(TYPE a[], <span class="keywordtype">int</span> n, <span class="keywordtype">int</span> *indm);</div>
<div class="line"><a name="l00184"></a><span class="lineno"> 184</span> </div>
<div class="line"><a name="l00185"></a><span class="lineno"> 185</span>  <span class="comment">/***********************/</span></div>
<div class="line"><a name="l00186"></a><span class="lineno"> 186</span>  <span class="comment">/* string operations */</span></div>
<div class="line"><a name="l00187"></a><span class="lineno"> 187</span>  <span class="comment">/***********************/</span></div>
<div class="line"><a name="l00188"></a><span class="lineno"> 188</span>  <span class="comment">// http://www.cplusplus.com/articles/D9j2Nwbp/</span></div>
<div class="line"><a name="l00189"></a><span class="lineno"> 189</span>  <span class="keyword">template</span> < <span class="keyword">typename</span> TYPE ></div>
<div class="line"><a name="l00190"></a><span class="lineno"> 190</span>  <span class="keyword">static</span> std::string NumberToString ( TYPE Number ){</div>
<div class="line"><a name="l00191"></a><span class="lineno"> 191</span>  std::ostringstream ss;</div>
<div class="line"><a name="l00192"></a><span class="lineno"> 192</span>  ss << Number;</div>
<div class="line"><a name="l00193"></a><span class="lineno"> 193</span>  <span class="keywordflow">return</span> ss.str();</div>
<div class="line"><a name="l00194"></a><span class="lineno"> 194</span>  };</div>
<div class="line"><a name="l00195"></a><span class="lineno"> 195</span> </div>
<div class="line"><a name="l00196"></a><span class="lineno"> 196</span>  <span class="comment">//http://www.cplusplus.com/articles/D9j2Nwbp/</span></div>
<div class="line"><a name="l00197"></a><span class="lineno"> 197</span>  <span class="keyword">template</span> < <span class="keyword">typename</span> TYPE ></div>
<div class="line"><a name="l00198"></a><span class="lineno"> 198</span>  <span class="keyword">static</span> TYPE StringToNumber ( <span class="keyword">const</span> std::string &Text ){</div>
<div class="line"><a name="l00199"></a><span class="lineno"> 199</span>  std::istringstream ss(Text);</div>
<div class="line"><a name="l00200"></a><span class="lineno"> 200</span>  TYPE result;</div>
<div class="line"><a name="l00201"></a><span class="lineno"> 201</span>  <span class="keywordflow">return</span> ss >> result ? result : 0;</div>
<div class="line"><a name="l00202"></a><span class="lineno"> 202</span>  };</div>
<div class="line"><a name="l00203"></a><span class="lineno"> 203</span> </div>
<div class="line"><a name="l00204"></a><span class="lineno"> 204</span>  <span class="comment">// for example to turn acquisition time to seconds</span></div>
<div class="line"><a name="l00205"></a><span class="lineno"> 205</span>  <span class="keyword">template</span> < <span class="keyword">typename</span> TYPE ></div>
<div class="line"><a name="l00206"></a><span class="lineno"> 206</span>  <span class="keyword">static</span> TYPE dicomTime2Seconds(std::string dicomTimeString);</div>
<div class="line"><a name="l00207"></a><span class="lineno"> 207</span> </div>
<div class="line"><a name="l00208"></a><span class="lineno"> 208</span>  <span class="comment">/***********************/</span></div>
<div class="line"><a name="l00209"></a><span class="lineno"> 209</span>  <span class="comment">/* threading */</span></div>
<div class="line"><a name="l00210"></a><span class="lineno"> 210</span>  <span class="comment">/***********************/</span></div>
<div class="line"><a name="l00211"></a><span class="lineno"> 211</span>  <span class="keyword">template</span> < <span class="keyword">typename</span> TYPE ></div>
<div class="line"><a name="l00212"></a><span class="lineno"> 212</span>  <span class="keyword">static</span> std::vector<int> bounds(<span class="keywordtype">int</span> parts, <span class="keywordtype">int</span> mem);</div>
<div class="line"><a name="l00213"></a><span class="lineno"> 213</span> </div>
<div class="line"><a name="l00214"></a><span class="lineno"> 214</span>  <span class="comment">/***********************/</span></div>
<div class="line"><a name="l00215"></a><span class="lineno"> 215</span>  <span class="comment">/* files */</span></div>
<div class="line"><a name="l00216"></a><span class="lineno"> 216</span>  <span class="comment">/***********************/</span></div>
<div class="line"><a name="l00217"></a><span class="lineno"> 217</span> </div>
<div class="line"><a name="l00218"></a><span class="lineno"> 218</span>  <span class="keyword">static</span> std::string PathSeparator(){</div>
<div class="line"><a name="l00219"></a><span class="lineno"> 219</span> <span class="preprocessor">#if defined(WIN32) || defined(_WIN32) || defined __CYGWIN__</span></div>
<div class="line"><a name="l00220"></a><span class="lineno"> 220</span> <span class="preprocessor"></span> <span class="keywordflow">return</span> std::string(<span class="stringliteral">"\\"</span>);</div>
<div class="line"><a name="l00221"></a><span class="lineno"> 221</span> <span class="preprocessor">#else</span></div>
<div class="line"><a name="l00222"></a><span class="lineno"> 222</span> <span class="preprocessor"></span> <span class="keywordflow">return</span> std::string(<span class="stringliteral">"/"</span>);</div>
<div class="line"><a name="l00223"></a><span class="lineno"> 223</span> <span class="preprocessor">#endif</span></div>
<div class="line"><a name="l00224"></a><span class="lineno"> 224</span> <span class="preprocessor"></span> }</div>
<div class="line"><a name="l00225"></a><span class="lineno"> 225</span> </div>
<div class="line"><a name="l00226"></a><span class="lineno"> 226</span>  <span class="comment">// http://www.cplusplus.com/reference/string/string/find_last_of/</span></div>
<div class="line"><a name="l00227"></a><span class="lineno"> 227</span>  <span class="keyword">static</span> <span class="keywordtype">void</span> splitFilename (<span class="keyword">const</span> std::string& str, std::string &path, std::string &file) {</div>
<div class="line"><a name="l00228"></a><span class="lineno"> 228</span>  <span class="comment">//std::cout << "Splitting: " << str << '\n';</span></div>
<div class="line"><a name="l00229"></a><span class="lineno"> 229</span>  std::size_t found = str.find_last_of(<span class="stringliteral">"/\\"</span>);</div>
<div class="line"><a name="l00230"></a><span class="lineno"> 230</span>  path = str.substr(0,found);</div>
<div class="line"><a name="l00231"></a><span class="lineno"> 231</span>  file = str.substr(found+1);</div>
<div class="line"><a name="l00232"></a><span class="lineno"> 232</span>  }</div>
<div class="line"><a name="l00233"></a><span class="lineno"> 233</span> </div>
<div class="line"><a name="l00234"></a><span class="lineno"> 234</span>  <span class="comment">// http://www.cplusplus.com/doc/tutorial/files/</span></div>
<div class="line"><a name="l00235"></a><span class="lineno"> 235</span>  <span class="keyword">static</span> std::vector <std::string> readFile(<span class="keyword">const</span> std::string filePath){</div>
<div class="line"><a name="l00236"></a><span class="lineno"> 236</span>  std::vector <std::string> fileContent;</div>
<div class="line"><a name="l00237"></a><span class="lineno"> 237</span>  std::string line;</div>
<div class="line"><a name="l00238"></a><span class="lineno"> 238</span> </div>
<div class="line"><a name="l00239"></a><span class="lineno"> 239</span>  <span class="keywordflow">try</span> {</div>
<div class="line"><a name="l00240"></a><span class="lineno"> 240</span>  std::ifstream myfile(filePath.c_str());</div>
<div class="line"><a name="l00241"></a><span class="lineno"> 241</span>  <span class="keywordflow">if</span> (myfile.is_open()) {</div>
<div class="line"><a name="l00242"></a><span class="lineno"> 242</span>  <span class="keywordflow">while</span> (getline(myfile, line)) {</div>
<div class="line"><a name="l00243"></a><span class="lineno"> 243</span>  fileContent.push_back(line);</div>
<div class="line"><a name="l00244"></a><span class="lineno"> 244</span>  }</div>
<div class="line"><a name="l00245"></a><span class="lineno"> 245</span>  myfile.close();</div>
<div class="line"><a name="l00246"></a><span class="lineno"> 246</span>  } <span class="keywordflow">else</span> {</div>
<div class="line"><a name="l00247"></a><span class="lineno"> 247</span>  printf(<span class="stringliteral">"Unable to open file: %s"</span>, filePath.c_str() );</div>
<div class="line"><a name="l00248"></a><span class="lineno"> 248</span>  }</div>
<div class="line"><a name="l00249"></a><span class="lineno"> 249</span>  } <span class="keywordflow">catch</span> (<span class="keyword">const</span> std::exception& e) {</div>
<div class="line"><a name="l00250"></a><span class="lineno"> 250</span>  std::cout << e.what() << std::endl;</div>
<div class="line"><a name="l00251"></a><span class="lineno"> 251</span>  printf(<span class="stringliteral">"Unable to read the file: %s"</span>, filePath.c_str() );</div>
<div class="line"><a name="l00252"></a><span class="lineno"> 252</span>  }</div>
<div class="line"><a name="l00253"></a><span class="lineno"> 253</span>  <span class="keywordflow">return</span> fileContent;</div>
<div class="line"><a name="l00254"></a><span class="lineno"> 254</span>  }</div>
<div class="line"><a name="l00255"></a><span class="lineno"> 255</span> </div>
<div class="line"><a name="l00256"></a><span class="lineno"> 256</span>  <span class="comment">//static bool isFile(const char* path) {</span></div>
<div class="line"><a name="l00257"></a><span class="lineno"> 257</span>  <span class="comment">// struct stat buf;</span></div>
<div class="line"><a name="l00258"></a><span class="lineno"> 258</span>  <span class="comment">// stat(path, &buf);</span></div>
<div class="line"><a name="l00259"></a><span class="lineno"> 259</span>  <span class="comment">// return S_ISREG(buf.st_mode);</span></div>
<div class="line"><a name="l00260"></a><span class="lineno"> 260</span>  <span class="comment">//}</span></div>
<div class="line"><a name="l00261"></a><span class="lineno"> 261</span> </div>
<div class="line"><a name="l00262"></a><span class="lineno"> 262</span>  <span class="comment">//static bool isDir(const char* path) {</span></div>
<div class="line"><a name="l00263"></a><span class="lineno"> 263</span>  <span class="comment">// struct stat buf;</span></div>
<div class="line"><a name="l00264"></a><span class="lineno"> 264</span>  <span class="comment">// stat(path, &buf);</span></div>
<div class="line"><a name="l00265"></a><span class="lineno"> 265</span>  <span class="comment">// return S_ISDIR(buf.st_mode);</span></div>
<div class="line"><a name="l00266"></a><span class="lineno"> 266</span>  <span class="comment">//}</span></div>
<div class="line"><a name="l00267"></a><span class="lineno"> 267</span> </div>
<div class="line"><a name="l00268"></a><span class="lineno"> 268</span> <span class="keyword">private</span>:</div>
<div class="line"><a name="l00269"></a><span class="lineno"> 269</span>  <span class="comment">// can this implementation of quicksort be improved? http://codereview.stackexchange.com/questions/77782/quick-sort-implementation</span></div>
<div class="line"><a name="l00270"></a><span class="lineno"> 270</span>  <span class="keyword">template</span>< <span class="keyword">typename</span> TYPE ></div>
<div class="line"><a name="l00271"></a><span class="lineno"> 271</span>  <span class="keyword">static</span> <span class="keywordtype">void</span> quickSort(TYPE arr[], <span class="keywordtype">int</span> left, <span class="keywordtype">int</span> right);</div>
<div class="line"><a name="l00272"></a><span class="lineno"> 272</span> </div>
<div class="line"><a name="l00273"></a><span class="lineno"> 273</span>  <span class="keyword">template</span>< <span class="keyword">typename</span> TYPE ></div>
<div class="line"><a name="l00274"></a><span class="lineno"> 274</span>  <span class="keyword">static</span> <span class="keywordtype">void</span> quickSortIndex(TYPE arr[], <span class="keywordtype">int</span> indexArray[], <span class="keywordtype">int</span> left, <span class="keywordtype">int</span> right);</div>
<div class="line"><a name="l00275"></a><span class="lineno"> 275</span> </div>
<div class="line"><a name="l00276"></a><span class="lineno"> 276</span> };</div>
<div class="line"><a name="l00277"></a><span class="lineno"> 277</span> </div>
<div class="line"><a name="l00278"></a><span class="lineno"> 278</span> <span class="preprocessor">#include "KWUtil.hxx"</span></div>
<div class="line"><a name="l00279"></a><span class="lineno"> 279</span> </div>
<div class="line"><a name="l00280"></a><span class="lineno"> 280</span> <span class="preprocessor">#endif </span><span class="comment">/* KWUtil_h */</span><span class="preprocessor"></span></div>
<div class="ttc" id="class_k_w_util_html_aec00dd2420ac8d850284db70c71c1c16"><div class="ttname"><a href="class_k_w_util.html#aec00dd2420ac8d850284db70c71c1c16">KWUtil::printVectorNewline</a></div><div class="ttdeci">static void printVectorNewline(const std::string &name, const std::vector< TYPE > vector)</div><div class="ttdef"><b>Definition:</b> KWUtil.hxx:44</div></div>
<div class="ttc" id="class_k_w_util_html"><div class="ttname"><a href="class_k_w_util.html">KWUtil</a></div><div class="ttdef"><b>Definition:</b> KWUtil.h:39</div></div>
<div class="ttc" id="class_k_w_util_html_acc956bb7cbedc39fbca11a6414b66dac"><div class="ttname"><a href="class_k_w_util.html#acc956bb7cbedc39fbca11a6414b66dac">KWUtil::printVector</a></div><div class="ttdeci">static void printVector(const std::string &name, const std::vector< TYPE > vector)</div><div class="ttdef"><b>Definition:</b> KWUtil.hxx:35</div></div>
<div class="ttc" id="class_k_w_util_html_a80504801c382f1ac367bcf0787fb18c2"><div class="ttname"><a href="class_k_w_util.html#a80504801c382f1ac367bcf0787fb18c2">KWUtil::calcMatrixInverse3x3</a></div><div class="ttdeci">static int calcMatrixInverse3x3(const TYPE *matrix, TYPE *matrixInverse)</div><div class="ttdef"><b>Definition:</b> KWUtil.hxx:426</div></div>
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