a5636db13fcc88d667625b6990d592b5 *DESCRIPTION
995d68253cab3efaac8db257ba255afb *NAMESPACE
ddfbfcb46127d4402327b3d509f813fd *R/attractorsToLaTeX.R
0e037f01fa88a832cb43d3a9d5e9f5dd *R/binarizeTimeSeries.R
6f0fd254b9797de877b13cdef6bedc44 *R/chooseNetwork.R
8fedce95c2aedd72c7ab350dbb27b413 *R/edgeDetector.R
5bdd9330e2e924f6673be5d18c25366d *R/fixGenes.R
bfb75bab4bce1e7fd3c5bc83d82a784c *R/generateRandomNKNetwork.R
211ceac9058782dd0fc5347f762fd572 *R/getAttractors.R
939ba469c5b69af9cb02d3457c989536 *R/getBasinOfAttraction.R
cc7f1f42552e777af66b436eea649c20 *R/getPathToAttractor.R
1ab4ae1e73f453d85512103d077667d6 *R/getStateSummary.R
a45f67785e1846f8482c9ff10debd95c *R/getTransitionProbabilities.R
e6d1b2c4f16abcb5970173c7f7ef280a *R/getTransitionTable.R
0c39312e4d917cd0cce9403bb8172685 *R/helpers.R
e2c78c8f409fc592273fc48fcbdde0dd *R/loadBioTapestry.R
b66980d3a06e7786aa5a1ffad4f9728d *R/loadNetwork.R
396c9a807782221a0b9181be553b3cb7 *R/markovSimulation.R
41c21fcab38d434e2de877d79d435b59 *R/perturbNetwork.R
9bdffd8873d24dffcbac26900993595a *R/plotAttractors.R
06bae2c63b309f3577ebbb8e0f716e8c *R/plotNetworkWiring.R
a04b208788b419584a8af04ec41c6b6c *R/plotPBNTransitions.R
e77e5e53ef081f4d3976ca1761f7a85d *R/plotStateGraph.R
3c84f69a1018a2b15123bc4a3e7b6296 *R/print.AttractorInfo.R
bd5b5182c9a4321e0051be7f40bcbf6f *R/print.BooleanNetwork.R
09ac08c8cb2ef098c96a86de93e5ad7c *R/print.BooleanStateInfo.R
8d47aaddb2e451a4202110a5fc029782 *R/print.MarkovSimulation.R
6cc5b06ed784cbb901ebefed27370285 *R/print.ProbabilisticBooleanNetwork.R
2943627a6599f050826dd4b02ef3b722 *R/print.TransitionTable.R
073be0022b71796f9b88b5454a5485b6 *R/reconstructNetwork.R
f9055460bc6913f7919a51f6371164d9 *R/scanStatistic.R
24af8303785a425bcf53114448513237 *R/simplifyNetwork.R
a829bd08b755797c8e48effb4779d7e3 *R/stateTransition.R
faee255056f4ad4607a43c46e7c9101b *R/testNetworkProperties.R
ed4c8d17bbef54aaca1917bfadc8b6ee *R/toPajek.R
98f1852c4cdae662fb15a186a90c98bb *R/zeta.R
cef6ddd9d3b69bfa32f3c5950e9502c6 *data/cellcycle.rda
2162a3dfd9f29f06223413307dd177c8 *data/examplePBN.rda
8919de127f7ee2391900468a36c5dcd4 *data/yeastTimeSeries.rda
62409980eecaca8e52f1d495f499d6bd *inst/CITATION
73f3ca1e2c6d02d43f8248c34cbe2719 *inst/doc/BoolNet_package_vignette.Snw
56b012bef8b9eb77ec6ee8c50213b838 *inst/doc/BoolNet_package_vignette.bib
b4fbd62645e93ac53005446fd204166c *inst/doc/BoolNet_package_vignette.pdf
56dffdbcf065597916be54cd3093a497 *inst/doc/attractor1.pdf
462943d1a5e8c9e9e2c8016b1123ae4c *inst/doc/attractor2.pdf
182f17338132fdac2a557f97ce9d5161 *inst/doc/basinsize.pdf
cbc02d945670e5381418720262b10955 *inst/doc/biotap_initval.png
530409792bed5d5a53140e85554b9d61 *inst/doc/biotap_logic.png
d4a2fcf1d0a873afde1c021019649014 *inst/doc/biotap_model.png
e02e5fea28346a3d8162b4feaa6ffb05 *inst/doc/biotap_sim_properties.png
fcb0ddc4a26eb5062f05b55032e5b151 *inst/doc/cellcycle.txt
27bccf40991bbe762bc274cbd7874f40 *inst/doc/example.btp
6205344ebd21ac18f56cd007d41db949 *inst/doc/indegree.pdf
278b58af8e047bce2f4da4ec56c43102 *inst/doc/indegree_kl.pdf
d6aa77a2d43960ebb98c288990d3fe41 *inst/doc/pajek.png
6281e84e63e0fa1cfd41266f7fc642de *inst/doc/pbntransitions.pdf
afa4bc65fe533ee9ffdeb8808caa76c1 *inst/doc/piecewisestategraph.pdf
79f46d5824454f2f2cef54b3709962a5 *inst/doc/robustness.pdf
9cdaa6def60436caa3b3ac2b0e918a0c *inst/doc/stategraph.pdf
99c3cfee3a4d14bcf7dd0b4aac27916b *inst/doc/wiring.pdf
d86a9a94edb2c17de545b0d529d440ad *inst/doc/wiring_biotap.pdf
dc4c06d0c9ba98203bd35a6f84b40f88 *man/BoolNet-package.Rd
af1f8b36e0b39d8cb336a4bce1d1f9c1 *man/attractorsToLaTeX.Rd
c7ee70e4df4a035948f39fc5223baf24 *man/binarizeTimeSeries.Rd
b905157206c49213275eac00525457a6 *man/cellcycle.Rd
ce444e572da2630f2ca36d66cc845a63 *man/chooseNetwork.Rd
39a6487fc316216980735cbfccd13850 *man/examplePBN.Rd
cb0295d26ae9dd0d3a4bac076a53cd25 *man/fixGenes.Rd
c157bdcce72ab4988cafed05407b47c1 *man/generateRandomNKNetwork.Rd
c8859f06712f6367e43d80a55c0f6120 *man/getAttractors.Rd
9e1be7bd41420a3415d0cee12606a2bf *man/getBasinOfAttraction.Rd
ba8315ec7256869a6f63c32a40e4e5c9 *man/getPathToAttractor.Rd
4afe797720361df3a7236b61250772f5 *man/getStateSummary.Rd
e71b416c2d31488e7b0e94de1f8552d0 *man/getTransitionProbabilities.Rd
9b87fc5eb9bd1866b883d6d31ecccd79 *man/getTransitionTable.Rd
b683de5e08edfc0794ce8215a25bd47f *man/loadBioTapestry.Rd
880943f1062897d1df61cf00d0086191 *man/loadNetwork.Rd
1ba2ebf869b191e38ce80143661a765c *man/markovSimulation.Rd
9f2fee491e5b40d9198423fe0c8d3cf0 *man/perturbNetwork.Rd
44e8866d67130d3ac0d9c9dcf90bcd04 *man/plotAttractors.Rd
1b5b983d4bf14562e331a6e5fc507cbe *man/plotNetworkWiring.Rd
51a1848bb68cd5be4c1653211d3f3d9a *man/plotPBNTransitions.Rd
72b656d3a8ec275abf9656a7ce663b41 *man/plotStateGraph.Rd
5f379a9e2b4a9a418d8b665af74757be *man/print.AttractorInfo.Rd
e0b2b98da9c074e4e30dd73d57dae9da *man/print.BooleanNetwork.Rd
b480ee06d8d8c2ade8ad0b5c89a13a7e *man/print.MarkovSimulation.Rd
d03ef8645e4d3ad814798e882167aa8d *man/print.ProbabilisticBooleanNetwork.Rd
d6e7961146750c9b36106a8d280a1c09 *man/print.TransitionTable.Rd
3e127061f125154df0d5ec7feb58d3dd *man/reconstructNetwork.Rd
c66e9c3f129c4c3db79300376fc08122 *man/simplifyNetwork.Rd
deef899f8c83c1fdaa6bb7955bfaa457 *man/stateTransition.Rd
38ac0f8f17ead466b11b728eb0bf67cc *man/testNetworkProperties.Rd
24e245711e6f836d4c43432200ef9a34 *man/toPajek.Rd
2f7a4285f220917476513c7bf38c4c47 *man/yeastTimeSeries.Rd
d1850aaab2d4136db08973fb725ab019 *src/boolean_network.c
2af41c3c546df4304e945a90cec506d0 *src/common.c
7b1393e449b83e92ece83639c4d2058b *src/common.h
4d84c855a4b2018355f7dff0dbcbb883 *src/probabilistic_boolean_network.c
686e443cfcfa3f597ea866bc25c356e7 *src/random.h
21124a2300cce73e04bc57846cc9166e *src/reconstruct_network.c
df1a8fe6baf803b783568eacf67172d6 *src/uthash.h