f9c81277a284438825ebef0409af11ea *DESCRIPTION
0330473046fae1b38a286f7bab45e77f *NAMESPACE
43dae0a83fdb00cd9a55693b0cc39f95 *R/attractorsToLaTeX.R
0e037f01fa88a832cb43d3a9d5e9f5dd *R/binarizeTimeSeries.R
6f0fd254b9797de877b13cdef6bedc44 *R/chooseNetwork.R
8fedce95c2aedd72c7ab350dbb27b413 *R/edgeDetector.R
5bdd9330e2e924f6673be5d18c25366d *R/fixGenes.R
2282b3cd2e3a997b2dc9f1b11928be0b *R/generateRandomNKNetwork.R
a4996d93c018a412a00add98e5f4ad4e *R/generateState.R
f80b8bfabc624f82d5ae2856605a4702 *R/generateTimeSeries.R
2883b41dbb100377bb988e9074f7eb13 *R/getAttractorSequence.R
7f2cfe87a31452452e82e577da7d6c20 *R/getAttractors.R
c243d4d818c7faac5eb71d3f79a67cc9 *R/getBasinOfAttraction.R
de7218e6ee192b7d2e93d3621a37fcbb *R/getPathToAttractor.R
1ab4ae1e73f453d85512103d077667d6 *R/getStateSummary.R
a45f67785e1846f8482c9ff10debd95c *R/getTransitionProbabilities.R
e6d1b2c4f16abcb5970173c7f7ef280a *R/getTransitionTable.R
0c39312e4d917cd0cce9403bb8172685 *R/helpers.R
e2c78c8f409fc592273fc48fcbdde0dd *R/loadBioTapestry.R
5ae513eac83c767cf2cf8d74f52a80af *R/loadNetwork.R
6cf426b55ed4fda07a34c45609d5db0c *R/markovSimulation.R
41c21fcab38d434e2de877d79d435b59 *R/perturbNetwork.R
b5f0676cbb35c28ddd5f7a0ae21aa3f8 *R/plotAttractors.R
dddbf2166ac469e0f2b8bf81864a0ebb *R/plotNetworkWiring.R
a04b208788b419584a8af04ec41c6b6c *R/plotPBNTransitions.R
4a09e6bf5f14248ae4c74f5ca7b5ef87 *R/plotSequence.R
54fa924a8c5a3494fb1faf7f9bfbf6ac *R/plotStateGraph.R
3c84f69a1018a2b15123bc4a3e7b6296 *R/print.AttractorInfo.R
bd5b5182c9a4321e0051be7f40bcbf6f *R/print.BooleanNetwork.R
09ac08c8cb2ef098c96a86de93e5ad7c *R/print.BooleanStateInfo.R
8d47aaddb2e451a4202110a5fc029782 *R/print.MarkovSimulation.R
6cc5b06ed784cbb901ebefed27370285 *R/print.ProbabilisticBooleanNetwork.R
2943627a6599f050826dd4b02ef3b722 *R/print.TransitionTable.R
e6e6011809d5058819fb8b34a6d17b21 *R/reconstructNetwork.R
f9055460bc6913f7919a51f6371164d9 *R/scanStatistic.R
ff5dff17d01495d7cbf4858210828a9d *R/sequenceToLaTeX.R
24af8303785a425bcf53114448513237 *R/simplifyNetwork.R
f6271d6e195aaf18a117a60a889b92f7 *R/stateTransition.R
faee255056f4ad4607a43c46e7c9101b *R/testNetworkProperties.R
ed4c8d17bbef54aaca1917bfadc8b6ee *R/toPajek.R
98f1852c4cdae662fb15a186a90c98bb *R/zeta.R
d48e5db778300998a88bbe7329fa8b1a *data/cellcycle.rda
2162a3dfd9f29f06223413307dd177c8 *data/examplePBN.rda
8919de127f7ee2391900468a36c5dcd4 *data/yeastTimeSeries.rda
62409980eecaca8e52f1d495f499d6bd *inst/CITATION
ee5aa48b7adb081820910444f5bf488b *inst/NEWS.Rd
ee20fb23dd0dfd8a60c400dab85a77be *inst/doc/BoolNet_package_vignette.Snw
66c98ffd50ae052da7458c3abcf685ed *inst/doc/BoolNet_package_vignette.bib
966cda2bc58ce764296e8216277e4699 *inst/doc/BoolNet_package_vignette.pdf
ec64012a9d59619ca10f7ec773a5ecc5 *inst/doc/attractor1.pdf
462943d1a5e8c9e9e2c8016b1123ae4c *inst/doc/attractor2.pdf
182f17338132fdac2a557f97ce9d5161 *inst/doc/basinsize.pdf
cbc02d945670e5381418720262b10955 *inst/doc/biotap_initval.png
530409792bed5d5a53140e85554b9d61 *inst/doc/biotap_logic.png
d4a2fcf1d0a873afde1c021019649014 *inst/doc/biotap_model.png
e02e5fea28346a3d8162b4feaa6ffb05 *inst/doc/biotap_sim_properties.png
fcb0ddc4a26eb5062f05b55032e5b151 *inst/doc/cellcycle.txt
27bccf40991bbe762bc274cbd7874f40 *inst/doc/example.btp
6205344ebd21ac18f56cd007d41db949 *inst/doc/indegree.pdf
278b58af8e047bce2f4da4ec56c43102 *inst/doc/indegree_kl.pdf
d6aa77a2d43960ebb98c288990d3fe41 *inst/doc/pajek.png
6281e84e63e0fa1cfd41266f7fc642de *inst/doc/pbntransitions.pdf
afa4bc65fe533ee9ffdeb8808caa76c1 *inst/doc/piecewisestategraph.pdf
79f46d5824454f2f2cef54b3709962a5 *inst/doc/robustness.pdf
68193e412ead38e34addce0b1e505f4a *inst/doc/sequence.pdf
9cdaa6def60436caa3b3ac2b0e918a0c *inst/doc/stategraph.pdf
99c3cfee3a4d14bcf7dd0b4aac27916b *inst/doc/wiring.pdf
d86a9a94edb2c17de545b0d529d440ad *inst/doc/wiring_biotap.pdf
99650c020f96cf73651ac7c730f710f3 *man/BoolNet-package.Rd
d678fa847d47f0d430737f1ced2a43dd *man/attractorsToLaTeX.Rd
3461bfd43dd57a88d01d83df611f95c0 *man/binarizeTimeSeries.Rd
3623b2fe85476af5336cf7e220c1d60e *man/cellcycle.Rd
56915bfdbf214e7ad18124c230328d2c *man/chooseNetwork.Rd
7914c426e149300046dfce5ca9517777 *man/examplePBN.Rd
d3024f8953aba3e68e0fd2b87a3a284b *man/fixGenes.Rd
e1fe64edf383173325e25c6f897d955b *man/generateRandomNKNetwork.Rd
b39f6dcecac5916ae668e3baf5f7d575 *man/generateState.Rd
aabaee93d2141f24082e785cccda9c67 *man/generateTimeSeries.Rd
61132c105569a7a91b8ff6c212135dc8 *man/getAttractorSequence.Rd
a09cf023a3e880e303eba0220488a216 *man/getAttractors.Rd
37525a1c61ad4c97c6457c5b1462e662 *man/getBasinOfAttraction.Rd
b3982cdc1b1cac176a41e01db04cecfa *man/getPathToAttractor.Rd
7ff770bb1a6cd2f607879b7440ee5bee *man/getStateSummary.Rd
87053d20084edd33f1c2fe2c2a4f9787 *man/getTransitionProbabilities.Rd
d13b00988178bf5916afd5d42420a78e *man/getTransitionTable.Rd
66045dee993b4d3b82db870bb4dfb127 *man/loadBioTapestry.Rd
d2338d0eacfdbace5d237815cc3c1700 *man/loadNetwork.Rd
e6d111802bb3f2c9809112102307a6b0 *man/markovSimulation.Rd
ded95935c60346bd4a76529c5938992d *man/perturbNetwork.Rd
9e9a654367d61c64698e6c841e142c88 *man/plotAttractors.Rd
afcdb5a1246882b58b770edbbba7940c *man/plotNetworkWiring.Rd
9ba39e20433ffd9cfa5c29a6293a9ae2 *man/plotPBNTransitions.Rd
a0eef2e9b91f5b51ad4ef0aea6faa2f6 *man/plotSequence.Rd
0be64e2169945202d9fd359434eee4c6 *man/plotStateGraph.Rd
5f379a9e2b4a9a418d8b665af74757be *man/print.AttractorInfo.Rd
e0b2b98da9c074e4e30dd73d57dae9da *man/print.BooleanNetwork.Rd
b480ee06d8d8c2ade8ad0b5c89a13a7e *man/print.MarkovSimulation.Rd
d03ef8645e4d3ad814798e882167aa8d *man/print.ProbabilisticBooleanNetwork.Rd
d6e7961146750c9b36106a8d280a1c09 *man/print.TransitionTable.Rd
a04d2632a4f3c1af824705713bc20a3d *man/reconstructNetwork.Rd
14472cad7962ca4e700ff559f8d55b35 *man/sequenceToLaTeX.Rd
027859cf76ad9977fd76e9b9df26bf80 *man/simplifyNetwork.Rd
68e41359ee75eed8688523aa904b961f *man/stateTransition.Rd
839cb9abac605660c7f5c0eabac3385f *man/testNetworkProperties.Rd
78ad89ec70ceb517b847d89b42ef6673 *man/toPajek.Rd
7ffc48740e826cbf5c56c11fb8dfe9df *man/yeastTimeSeries.Rd
44a228492f151c5704133e6522086ba3 *src/boolean_network.c
5e6f2933daf6b58c94e740e16fd026cc *src/common.c
955d4becfadeba658ad6ea6ccdc2ca6f *src/common.h
675c81ba1bf5f01462da08a7daae556b *src/probabilistic_boolean_network.c
686e443cfcfa3f597ea866bc25c356e7 *src/random.h
31cc7ec675c0399d69b068e501a2bbd7 *src/reconstruct_network.c
460b4e88a7af5ba2c60231ca9f3644c8 *src/uthash.h