https://github.com/mossmatters/HybPiper
History
Tip revision: 01d2665c870cb89b5e3fbaef156ed3c16b68d199 authored by Nathan Weeks on 14 August 2020, 19:12:36 UTC
Dockerize
Tip revision: 01d2665
File Mode Size
examples
test_dataset
Dockerfile -rw-r--r-- 526 bytes
LICENSE.txt -rw-r--r-- 34.3 KB
README.md -rw-r--r-- 10.6 KB
citation_list.txt -rw-r--r-- 3.6 KB
cleanup.py -rwxr-xr-x 1.7 KB
depth_calculator.py -rwxr-xr-x 6.0 KB
distribute_reads_to_targets.py -rwxr-xr-x 3.4 KB
distribute_reads_to_targets_bwa.py -rwxr-xr-x 3.8 KB
distribute_targets.py -rwxr-xr-x 7.5 KB
exonerate_hits.py -rwxr-xr-x 30.2 KB
fasta_merge.py -rwxr-xr-x 5.6 KB
gene_recovery_heatmap.R -rw-r--r-- 1.8 KB
gene_recovery_heatmap_ggplot.R -rwxr-xr-x 1.9 KB
get_seq_lengths.py -rwxr-xr-x 2.6 KB
hybpiper_stats.py -rwxr-xr-x 5.7 KB
hybseq_summary.py -rwxr-xr-x 973 bytes
intronerate.py -rwxr-xr-x 13.7 KB
paralog_investigator.py -rwxr-xr-x 2.9 KB
paralog_retriever.py -rwxr-xr-x 1.7 KB
query_file_builder.py -rwxr-xr-x 3.7 KB
reads_first.py -rwxr-xr-x 35.5 KB
retrieve_sequences.py -rwxr-xr-x 2.3 KB
spades_runner.py -rwxr-xr-x 8.8 KB

README.md

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