https://github.com/mossmatters/HybPiper
Tip revision: 01d2665c870cb89b5e3fbaef156ed3c16b68d199 authored by Nathan Weeks on 14 August 2020, 19:12:36 UTC
Dockerize
Dockerize
Tip revision: 01d2665
| File | Mode | Size |
|---|---|---|
| examples | ||
| test_dataset | ||
| Dockerfile | -rw-r--r-- | 526 bytes |
| LICENSE.txt | -rw-r--r-- | 34.3 KB |
| README.md | -rw-r--r-- | 10.6 KB |
| citation_list.txt | -rw-r--r-- | 3.6 KB |
| cleanup.py | -rwxr-xr-x | 1.7 KB |
| depth_calculator.py | -rwxr-xr-x | 6.0 KB |
| distribute_reads_to_targets.py | -rwxr-xr-x | 3.4 KB |
| distribute_reads_to_targets_bwa.py | -rwxr-xr-x | 3.8 KB |
| distribute_targets.py | -rwxr-xr-x | 7.5 KB |
| exonerate_hits.py | -rwxr-xr-x | 30.2 KB |
| fasta_merge.py | -rwxr-xr-x | 5.6 KB |
| gene_recovery_heatmap.R | -rw-r--r-- | 1.8 KB |
| gene_recovery_heatmap_ggplot.R | -rwxr-xr-x | 1.9 KB |
| get_seq_lengths.py | -rwxr-xr-x | 2.6 KB |
| hybpiper_stats.py | -rwxr-xr-x | 5.7 KB |
| hybseq_summary.py | -rwxr-xr-x | 973 bytes |
| intronerate.py | -rwxr-xr-x | 13.7 KB |
| paralog_investigator.py | -rwxr-xr-x | 2.9 KB |
| paralog_retriever.py | -rwxr-xr-x | 1.7 KB |
| query_file_builder.py | -rwxr-xr-x | 3.7 KB |
| reads_first.py | -rwxr-xr-x | 35.5 KB |
| retrieve_sequences.py | -rwxr-xr-x | 2.3 KB |
| spades_runner.py | -rwxr-xr-x | 8.8 KB |
