f8a384b | Lars Bilke | 30 September 2021, 06:18:25 UTC | Merge branch 'notebook-artifact' into 'master' Draft: [ci] Notebook artifacts See merge request ogs/ogs!3808 | 30 September 2021, 06:18:25 UTC |
51758d7 | wenqing | 29 September 2021, 15:05:56 UTC | Merge branch 'TH2M_strain_perm' into 'master' [TH2M] Enable to use pressure, strain, stress dependent permeability models See merge request ogs/ogs!3804 | 29 September 2021, 15:05:56 UTC |
38b2d52 | Lars Bilke | 29 September 2021, 13:04:11 UTC | [ci] Save (processed) jupyter notebooks as artifacts. | 29 September 2021, 13:04:11 UTC |
1b48316 | Lars Bilke | 29 September 2021, 13:01:40 UTC | [ci] Don't store jupyter sif images as artifact. | 29 September 2021, 13:01:40 UTC |
29b62ea | Wenqing Wang | 28 September 2021, 14:13:07 UTC | [TH2M] Enable to use pressure, strain, stress dependent permeability models | 29 September 2021, 12:44:37 UTC |
e2b75f2 | Lars Bilke | 29 September 2021, 09:37:41 UTC | Merge branch 'jupyter-ogs' into 'master' [ci] Added ogs-serial-jupyter container image. Closes #3193 See merge request ogs/ogs!3776 | 29 September 2021, 09:37:41 UTC |
5909998 | Lars Bilke | 28 September 2021, 13:53:02 UTC | Formatting .gitlab-ci.yml. | 28 September 2021, 13:53:02 UTC |
89aab5d | Lars Bilke | 27 September 2021, 11:39:02 UTC | Added GitLab integration into ogs-serial-jupyter image. | 28 September 2021, 13:52:25 UTC |
b6f44f7 | Lars Bilke | 22 September 2021, 13:39:36 UTC | [web] Added notes on Windows usage. | 28 September 2021, 13:52:25 UTC |
fd7eacd | Lars Bilke | 22 September 2021, 10:11:47 UTC | [web] Use generated notebook output. | 28 September 2021, 13:52:25 UTC |
2da30e6 | Lars Bilke | 22 September 2021, 09:06:48 UTC | [ci] Enabled mfront (with Python bindings) in ogs-serial-jupyter image. | 28 September 2021, 13:52:24 UTC |
f6aab1b | Lars Bilke | 22 September 2021, 09:06:48 UTC | [ci] Enabled mfront (with Python bindings) in ogs-serial-jupyter image. | 28 September 2021, 13:52:24 UTC |
650310f | Lars Bilke | 20 September 2021, 19:31:49 UTC | [ci ]Added h5py to ogs-serial-jupyter image. | 28 September 2021, 13:52:23 UTC |
73bbe8a | Lars Bilke | 14 September 2021, 13:08:21 UTC | [ci] Added Jupyter notebook testing. | 28 September 2021, 13:52:17 UTC |
22fb917 | Dmitry Yu. Naumov | 27 September 2021, 12:07:35 UTC | Merge branch 'Server_Communication' into 'master' [BHE] Add server communication feature after each time step See merge request ogs/ogs!3793 | 27 September 2021, 12:07:35 UTC |
758df28 | Dmitry Yu. Naumov | 24 September 2021, 16:24:23 UTC | Merge branch 'TH2M_Liakopoulos' into 'master' TH2M Benchmark test Liakopoulos See merge request ogs/ogs!3795 | 24 September 2021, 16:24:23 UTC |
414b05f | Jakob Randow | 24 September 2021, 13:35:07 UTC | Added documentation file for server communication | 24 September 2021, 14:54:22 UTC |
8fd6ee7 | Haibing Shao | 23 September 2021, 09:27:57 UTC | read in the server communication switch correct naming and store the switch cosmetic change on create process file clang format the create process file fix Doxygen warning The parameter 'use_server_communication' belongs to the process 'HEAT_TRANSPORT_BHE' | 24 September 2021, 14:45:02 UTC |
404859a | Haibing Shao | 24 September 2021, 14:14:03 UTC | store the switch of using server communication in the data class store the if_use_tespy switch cosmetic change on process data clang format the process data file | 24 September 2021, 14:45:02 UTC |
063435a | Haibing Shao | 24 September 2021, 14:21:01 UTC | Add PostTimeStep function to the process file change definition of postTimeStepConcreteProcess successfully running (but tespySolver commented) State for building release version for additional tests (NOT final; tespySolver commented out) using the newly added switch Fixed server communication switch (OR instead of AND) correct the naming Extended "call BHEPythonBoundarycondition" clause cosmetic change of process file Code cosmetics #2 clang format the process file clean up the process file Apply 1 suggestion(s) to 1 file(s) Apply 1 suggestion(s) to 1 file(s) remove comments in process file | 24 September 2021, 14:45:02 UTC |
50b953e | Haibing Shao | 24 September 2021, 14:21:46 UTC | Add server communication to BC change definition of the function in BC file cosmetic change of the BHE boundary condition file clang format the BHE BC file clean up the BC file Apply 1 suggestion(s) to 1 file(s) remove comments from the BC file | 24 September 2021, 14:45:02 UTC |
ee6dab0 | Lars Bilke | 22 September 2021, 12:29:15 UTC | [cmake] Fixed PYTHON_PACKAGES issue. | 24 September 2021, 14:45:02 UTC |
b63cfd4 | Jakob Randow | 22 September 2021, 12:54:17 UTC | test case for server communication keep false in test input file. Update Tests Update Tests Update Tests and delete ogs.exe | 24 September 2021, 14:45:02 UTC |
4470d06 | Dmitri Naumov | 23 September 2021, 11:17:20 UTC | [T/TH2M] Liakopoulos; Add Newton ctest version. The reference files are copies of the central-differences because on Windows the symbolic links are not really supported. | 24 September 2021, 10:00:29 UTC |
89f6dfd | Dmitri Naumov | 23 September 2021, 10:50:18 UTC | [T/TH2M] Liakopoulos; Stricter ctest tolerances. | 24 September 2021, 10:00:29 UTC |
0fc7853 | Norbert Grunwald | 22 September 2021, 08:17:01 UTC | [T/TH2M] Add Liakopoulos benchmark reference files | 24 September 2021, 10:00:29 UTC |
d1ef995 | Norbert Grunwald | 22 September 2021, 08:15:04 UTC | [T/TH2M] Add Liakopoulos benchmark for TH2M process | 24 September 2021, 10:00:29 UTC |
a1cc159 | Tom Fischer | 24 September 2021, 08:57:50 UTC | Merge branch 'material-id-list-parser-refactoring' into 'master' Refactored material ID list parser See merge request ogs/ogs!3797 | 24 September 2021, 08:57:50 UTC |
d495370 | Lars Bilke | 24 September 2021, 07:41:17 UTC | Merge branch 'apple-arm-ci' into 'master' [ci] Apple ARM (M1) jobs See merge request ogs/ogs!3757 | 24 September 2021, 07:41:17 UTC |
2da05e2 | Lars Bilke | 27 August 2021, 13:53:19 UTC | Bump minimum Conan to 1.34 for Apple ARM support. https://github.com/conan-io/conan/pull/8501 | 24 September 2021, 07:38:25 UTC |
e2aa0a5 | Lars Bilke | 27 August 2021, 13:07:01 UTC | [cmake] When using poetry use latest python version. | 24 September 2021, 07:38:25 UTC |
d446988 | Lars Bilke | 27 August 2021, 08:28:18 UTC | [ci] Added CI job (cli-only) for Apple ARM. GUI build is not supported yet as Qt is not fully supported on Apple ARM, see https://www.qt.io/blog/qt-on-apple-silicon. | 24 September 2021, 07:38:25 UTC |
ecc1d05 | Christoph Lehmann | 23 September 2021, 12:54:49 UTC | link to gmock | 23 September 2021, 12:55:20 UTC |
a270116 | Christoph Lehmann | 23 September 2021, 11:12:16 UTC | Fixed typo | 23 September 2021, 11:12:39 UTC |
f0da0e5 | Christoph Lehmann | 23 September 2021, 09:53:58 UTC | Changed Doxygen file header | 23 September 2021, 09:53:58 UTC |
67fa8f9 | Dmitry Yu. Naumov | 23 September 2021, 09:51:21 UTC | Changed Doxygen comment | 23 September 2021, 09:51:21 UTC |
e491d77 | Christoph Lehmann | 23 September 2021, 09:46:11 UTC | Added further tests | 23 September 2021, 09:46:43 UTC |
1098341 | Christoph Lehmann | 23 September 2021, 09:02:31 UTC | Refactored material ID list parser Added unit tests, caught many corner cases | 23 September 2021, 09:08:29 UTC |
20e2990 | Lars Bilke | 14 September 2021, 10:40:43 UTC | [ci] Build web site with notebook pages. | 22 September 2021, 13:50:20 UTC |
36ff1ef | Lars Bilke | 14 September 2021, 09:52:20 UTC | Added first Jupyter notebook. | 22 September 2021, 13:50:20 UTC |
3c341b5 | Lars Bilke | 14 September 2021, 09:40:23 UTC | [web] Added Jupyter notebook styling. | 22 September 2021, 13:50:19 UTC |
8ba13e8 | Lars Bilke | 14 September 2021, 09:39:21 UTC | [ci] Added nb2hugo to ogs-serial-jupyter image. | 22 September 2021, 13:50:19 UTC |
cb77437 | Lars Bilke | 14 September 2021, 09:34:39 UTC | [web] Updated tailwindcss. | 22 September 2021, 13:50:19 UTC |
054b307 | Lars Bilke | 10 September 2021, 10:41:59 UTC | Added nbconvert and nbdime to ogs-serial-jupyter container image. | 22 September 2021, 13:50:19 UTC |
4aa582a | Lars Bilke | 10 September 2021, 09:34:14 UTC | Added PyVista to ogs-serial-jupyter container image. | 22 September 2021, 13:50:18 UTC |
bdbf511 | Lars Bilke | 09 September 2021, 10:57:51 UTC | [web] Added Jupyter container docs. | 22 September 2021, 13:50:18 UTC |
d21e42f | Lars Bilke | 08 September 2021, 13:06:08 UTC | [ci] Added ogs-serial-jupyter container image. Image is based on jupyter/base-notebook and additionally contains ogs and all tools as well as ogs6py. Usage with Docker: $ docker run --rm -p 8888:8888 -v $PWD:/home/jovyan/work --user `id -u $USER` --group-add users registry.opengeosys.org/ogs/ogs/ogs-serial-jupyter Usage with Singularity: Download sif image from CI artifacts, then run $ singularity run [image_name] | 22 September 2021, 13:50:15 UTC |
162f31e | Dmitry Yu. Naumov | 22 September 2021, 12:55:41 UTC | Merge branch 'RemoveGlobalNodeNumberingDependenciesInMesh' into 'master' Use local topology information while removing global numbering dependencies in Mesh. Closes #3161 See merge request ogs/ogs!3788 | 22 September 2021, 12:55:41 UTC |
33722ed | Dmitri Naumov | 21 September 2021, 21:49:22 UTC | [T/partmesh] Update config files references. The changes to computation of the number of base nodes are reflected in the "configuration"/discription files. The partitioned data (binary element and node) files are the same, i.e. the partitioning did not change. | 22 September 2021, 09:23:01 UTC |
0866cbd | Dmitri Naumov | 17 September 2021, 12:28:05 UTC | [MeL] Remove Mesh-internal number of base nodes. And with it all of the checks and recalculations are obsolete and removed too. | 22 September 2021, 09:23:01 UTC |
f803723 | Dmitri Naumov | 20 September 2021, 18:40:47 UTC | [MeL] Rewrite use isBaseNode in isGhostNode query. Replace first part of the query with isBaseNode() as in previous commits. Use getNumberOfBaseNodes in calculation of "active" (regular) nodes. | 22 September 2021, 09:22:27 UTC |
d42cf40 | Dmitri Naumov | 17 September 2021, 12:14:31 UTC | [MeL] Make getNumberOfBaseNodes() independent of numbering. The new implementation uses only local topology information to distinguish base and "higher" order nodes. | 22 September 2021, 09:20:29 UTC |
a14491f | Dmitri Naumov | 17 September 2021, 12:00:36 UTC | [MeL] Replace isNonlinear with hasNonlinearElement The latter relies on local information of element types and number of nodes, not the global numbering of nodes. | 22 September 2021, 09:20:29 UTC |
8b5e1bf | Lars Bilke | 21 September 2021, 19:38:04 UTC | Merge branch 'fix-container' into 'master' [ci] Fix container job See merge request ogs/ogs!3794 | 21 September 2021, 19:38:04 UTC |
fc33d48 | Lars Bilke | 21 September 2021, 12:16:31 UTC | Updated container-maker. | 21 September 2021, 18:07:09 UTC |
0587e98 | Dmitry Yu. Naumov | 21 September 2021, 17:54:22 UTC | Merge branch 'TH2M_Jacobian' into 'master' Partial TH2M analytical Jacobian See merge request ogs/ogs!3767 | 21 September 2021, 17:54:22 UTC |
0cf6f0a | Dmitri Naumov | 21 September 2021, 13:18:16 UTC | [ctest] Let AddTest delete only generated files. Otherwise all files, even if not the ctest's generated files, namely the reference files are deleted in the build directories. | 21 September 2021, 13:23:34 UTC |
c082b53 | Dmitri Naumov | 15 September 2021, 12:53:33 UTC | [T/TH2M] Reference files for Newton tests. | 21 September 2021, 10:53:59 UTC |
78b5e5d | Dmitri Naumov | 27 August 2021, 15:10:35 UTC | [T/TH2M] Newton versions of existing ctests. | 21 September 2021, 10:53:59 UTC |
0854da7 | Dmitri Naumov | 31 August 2021, 10:24:31 UTC | [PL/TH2M] Partially implement analytical Jacobian. | 21 September 2021, 10:53:59 UTC |
1f37852 | Dmitri Naumov | 15 September 2021, 15:38:51 UTC | [T/TH2M] Relax testing tolerance slightly. | 21 September 2021, 10:53:58 UTC |
77bbb80 | Dmitry Yu. Naumov | 21 September 2021, 10:33:56 UTC | Merge branch 'solveReactionEquation' into 'master' [PL/CT] solve reaction equation See merge request ogs/ogs!3781 | 21 September 2021, 10:33:56 UTC |
d794276 | renchao_lu | 18 September 2021, 11:08:34 UTC | [Docu] add parameter documentation. | 21 September 2021, 09:45:54 UTC |
7e43522 | renchao_lu | 15 September 2021, 15:00:36 UTC | [T] update prj files and reference results. | 21 September 2021, 09:45:54 UTC |
c9d941c | renchao_lu | 17 September 2021, 22:07:25 UTC | [CL] store the referenced linear solver. | 21 September 2021, 09:45:54 UTC |
0d608dc | renchao_lu | 17 September 2021, 22:06:17 UTC | [CL] get the prescribed linear solver. | 21 September 2021, 09:45:54 UTC |
43fba5b | renchao_lu | 17 September 2021, 22:04:59 UTC | [CL] pass linear solvers to chemical system. | 21 September 2021, 09:45:54 UTC |
2198aa0 | renchao_lu | 17 September 2021, 22:03:40 UTC | [App] advance initialization of linear solvers. | 21 September 2021, 09:45:54 UTC |
726b4fc | renchao_lu | 14 September 2021, 15:58:24 UTC | [PL/CT] solve equation system. | 21 September 2021, 09:45:54 UTC |
f5a09b5 | renchao_lu | 14 September 2021, 15:56:46 UTC | [PL/CT] add reaction equation local assembler. | 21 September 2021, 09:45:54 UTC |
d091bb4 | renchao_lu | 14 September 2021, 15:55:14 UTC | [PL/CT] pass equation system. | 21 September 2021, 09:45:54 UTC |
905f988 | renchao_lu | 07 September 2021, 10:37:40 UTC | [PL/TimeLoop] solve reaction equation over processes. | 21 September 2021, 09:45:54 UTC |
65ef11d | renchao_lu | 07 September 2021, 10:24:44 UTC | [CL] get concentration in the reaction stage. | 21 September 2021, 09:45:54 UTC |
f87082b | Lars Bilke | 20 September 2021, 13:23:26 UTC | Merge branch 'git-optional' into 'master' [cmake] Make git optional. See merge request ogs/ogs!3783 | 20 September 2021, 13:23:26 UTC |
ba87dd3 | Lars Bilke | 15 September 2021, 06:33:46 UTC | [cmake] Make git optional. Need to set OGS_VERSION when git is not available. | 20 September 2021, 12:35:05 UTC |
c1289d5 | Dmitry Yu. Naumov | 20 September 2021, 11:55:59 UTC | Merge branch 'TH2M_small_fix_fatal_report' into 'master' [TH2M/PT] Addition to the error message in case of missing data in the prj-file See merge request ogs/ogs!3790 | 20 September 2021, 11:55:59 UTC |
a9245df | Norbert Grunwald | 03 September 2021, 09:03:00 UTC | [TH2M/PT] More information in case of ogs_fatal helps to find prj-error | 20 September 2021, 10:45:22 UTC |
d59411b | Dmitry Yu. Naumov | 20 September 2021, 08:53:11 UTC | Merge branch 'UseLocalInformationForBaseNodeConditions' into 'master' Use local information for base node conditions See merge request ogs/ogs!3786 | 20 September 2021, 08:53:11 UTC |
81ee6dd | Dmitry Yu. Naumov | 20 September 2021, 07:40:08 UTC | Merge branch 'SmallFixes' into 'master' Small code improvements - mainly removing unnecessary includes See merge request ogs/ogs!3789 | 20 September 2021, 07:40:08 UTC |
4ca900d | Dmitri Naumov | 16 September 2021, 16:23:23 UTC | [App/U] partmesh; Use local info for base nodes. | 20 September 2021, 07:23:15 UTC |
bcceef9 | Dmitri Naumov | 16 September 2021, 15:16:50 UTC | [MeL] Use local info for detecting base nodes. | 20 September 2021, 07:20:05 UTC |
516ed66 | Dmitry Yu. Naumov | 20 September 2021, 07:18:53 UTC | Merge branch 'MeshLibElementCleanup-RefactorNodesConnectedByElements' into 'master' [MeL/Mesh] Improves the memory footprint of the mesh. See merge request ogs/ogs!3785 | 20 September 2021, 07:18:53 UTC |
a7ff9cf | Thomas Fischer | 09 September 2021, 07:42:02 UTC | [A/U/ModelPreparation] Update copyright. | 20 September 2021, 07:03:02 UTC |
fb1b397 | Thomas Fischer | 17 September 2021, 10:52:12 UTC | [PL/SurfaceFlux] Rm unused includes Parameter.h, Process.h | 20 September 2021, 07:03:01 UTC |
ae94515 | Thomas Fischer | 17 September 2021, 10:48:40 UTC | [PL/Output] Rm unused include MathLib/LinAlg/LinAlg.h | 20 September 2021, 07:03:01 UTC |
f0ff4a0 | Thomas Fischer | 17 September 2021, 10:28:43 UTC | [PL/CT] Remove unused include readMeshFromFile. | 20 September 2021, 07:03:01 UTC |
261de7d | Lars Bilke | 20 September 2021, 06:54:14 UTC | [web] Fix wording on download page. Fixes #3196. | 20 September 2021, 06:54:14 UTC |
e6bbe71 | Dmitri Naumov | 17 September 2021, 11:47:02 UTC | [App/U] Use partition_copy from std ns explicitly. | 17 September 2021, 11:48:18 UTC |
23c23f2 | Dmitry Yu. Naumov | 17 September 2021, 09:46:44 UTC | Merge branch 'RM-TEST_thresholds' into 'master' RM Test: slightly change threshold for saturation See merge request ogs/ogs!3787 | 17 September 2021, 09:46:44 UTC |
e694093 | Jan Thiedau | 17 September 2021, 05:45:50 UTC | RM Test: slightly change threshold for saturation | 17 September 2021, 05:45:50 UTC |
01ec9e2 | Thomas Fischer | 16 September 2021, 15:01:20 UTC | [MeL/NodePartitionedMesh] Use fct. calculateNodesConnectedByElements. | 17 September 2021, 04:19:55 UTC |
8238eca | Thomas Fischer | 09 July 2021, 14:28:48 UTC | [MeL/Node] Rm node connection information. The connection information can be computed on the fly required. | 17 September 2021, 04:19:55 UTC |
b7e149c | Thomas Fischer | 09 July 2021, 14:27:27 UTC | [A | MeL | NL | T] Use fct. calculateNodesConnectedByElements. | 17 September 2021, 04:19:55 UTC |
97c6b24 | Thomas Fischer | 09 July 2021, 14:25:21 UTC | [MeL/Mesh] Make setNodesConnectedByElements a free fct. Rename setNodesConnectedByElements to calculateNodesConnectedByElements and make it a free function. This 'out sourcing' makes it possible to compute the connection information only when it is required. | 17 September 2021, 04:19:55 UTC |
f517310 | Dmitry Yu. Naumov | 16 September 2021, 20:30:14 UTC | Merge branch 'PhaseField' into 'master' Phase field-AT1 See merge request ogs/ogs!3779 | 16 September 2021, 20:30:14 UTC |
177209a | KeitaYoshioka | 08 September 2021, 15:37:03 UTC | Another model of phasefield (AT1) has been added. | 16 September 2021, 18:40:15 UTC |
6a57cea | Dmitry Yu. Naumov | 16 September 2021, 12:29:32 UTC | Merge branch 'doxygen-undoc-param' into 'master' [ci] Catch undocumented parameter in Doxygen output. See merge request ogs/ogs!3784 | 16 September 2021, 12:29:32 UTC |
421e76f | Dmitri Naumov | 15 September 2021, 19:53:50 UTC | [docs] Fix ogs_file_param call for doxygen. | 16 September 2021, 11:04:03 UTC |
cba1123 | Lars Bilke | 15 September 2021, 19:12:58 UTC | [ci] Catch undocumented parameter in Doxygen output. Will mark the job as yellow. | 16 September 2021, 11:04:03 UTC |
d8159b8 | Dmitry Yu. Naumov | 16 September 2021, 10:18:29 UTC | Merge branch 'TH2M_test_ideal_gas_law' into 'master' TH2M - Ideal gas law compression benchmark See merge request ogs/ogs!3766 | 16 September 2021, 10:18:29 UTC |