| ff8b642 | Dmitry Yu. Naumov | 22 September 2021, 09:24:46 UTC | Merge branch 'RemoveGlobalNodeNumberingDependenciesInMesh' into 'master' Draft: Use local topology information while removing global numbering dependencies in Mesh. Closes #3161 See merge request ogs/ogs!3788 | 22 September 2021, 09:24:46 UTC |
| 33722ed | Dmitri Naumov | 21 September 2021, 21:49:22 UTC | [T/partmesh] Update config files references. The changes to computation of the number of base nodes are reflected in the "configuration"/discription files. The partitioned data (binary element and node) files are the same, i.e. the partitioning did not change. | 22 September 2021, 09:23:01 UTC |
| 0866cbd | Dmitri Naumov | 17 September 2021, 12:28:05 UTC | [MeL] Remove Mesh-internal number of base nodes. And with it all of the checks and recalculations are obsolete and removed too. | 22 September 2021, 09:23:01 UTC |
| f803723 | Dmitri Naumov | 20 September 2021, 18:40:47 UTC | [MeL] Rewrite use isBaseNode in isGhostNode query. Replace first part of the query with isBaseNode() as in previous commits. Use getNumberOfBaseNodes in calculation of "active" (regular) nodes. | 22 September 2021, 09:22:27 UTC |
| d42cf40 | Dmitri Naumov | 17 September 2021, 12:14:31 UTC | [MeL] Make getNumberOfBaseNodes() independent of numbering. The new implementation uses only local topology information to distinguish base and "higher" order nodes. | 22 September 2021, 09:20:29 UTC |
| a14491f | Dmitri Naumov | 17 September 2021, 12:00:36 UTC | [MeL] Replace isNonlinear with hasNonlinearElement The latter relies on local information of element types and number of nodes, not the global numbering of nodes. | 22 September 2021, 09:20:29 UTC |
| 8b5e1bf | Lars Bilke | 21 September 2021, 19:38:04 UTC | Merge branch 'fix-container' into 'master' [ci] Fix container job See merge request ogs/ogs!3794 | 21 September 2021, 19:38:04 UTC |
| fc33d48 | Lars Bilke | 21 September 2021, 12:16:31 UTC | Updated container-maker. | 21 September 2021, 18:07:09 UTC |
| 0587e98 | Dmitry Yu. Naumov | 21 September 2021, 17:54:22 UTC | Merge branch 'TH2M_Jacobian' into 'master' Partial TH2M analytical Jacobian See merge request ogs/ogs!3767 | 21 September 2021, 17:54:22 UTC |
| 0cf6f0a | Dmitri Naumov | 21 September 2021, 13:18:16 UTC | [ctest] Let AddTest delete only generated files. Otherwise all files, even if not the ctest's generated files, namely the reference files are deleted in the build directories. | 21 September 2021, 13:23:34 UTC |
| c082b53 | Dmitri Naumov | 15 September 2021, 12:53:33 UTC | [T/TH2M] Reference files for Newton tests. | 21 September 2021, 10:53:59 UTC |
| 78b5e5d | Dmitri Naumov | 27 August 2021, 15:10:35 UTC | [T/TH2M] Newton versions of existing ctests. | 21 September 2021, 10:53:59 UTC |
| 0854da7 | Dmitri Naumov | 31 August 2021, 10:24:31 UTC | [PL/TH2M] Partially implement analytical Jacobian. | 21 September 2021, 10:53:59 UTC |
| 1f37852 | Dmitri Naumov | 15 September 2021, 15:38:51 UTC | [T/TH2M] Relax testing tolerance slightly. | 21 September 2021, 10:53:58 UTC |
| 77bbb80 | Dmitry Yu. Naumov | 21 September 2021, 10:33:56 UTC | Merge branch 'solveReactionEquation' into 'master' [PL/CT] solve reaction equation See merge request ogs/ogs!3781 | 21 September 2021, 10:33:56 UTC |
| d794276 | renchao_lu | 18 September 2021, 11:08:34 UTC | [Docu] add parameter documentation. | 21 September 2021, 09:45:54 UTC |
| 7e43522 | renchao_lu | 15 September 2021, 15:00:36 UTC | [T] update prj files and reference results. | 21 September 2021, 09:45:54 UTC |
| c9d941c | renchao_lu | 17 September 2021, 22:07:25 UTC | [CL] store the referenced linear solver. | 21 September 2021, 09:45:54 UTC |
| 0d608dc | renchao_lu | 17 September 2021, 22:06:17 UTC | [CL] get the prescribed linear solver. | 21 September 2021, 09:45:54 UTC |
| 43fba5b | renchao_lu | 17 September 2021, 22:04:59 UTC | [CL] pass linear solvers to chemical system. | 21 September 2021, 09:45:54 UTC |
| 2198aa0 | renchao_lu | 17 September 2021, 22:03:40 UTC | [App] advance initialization of linear solvers. | 21 September 2021, 09:45:54 UTC |
| 726b4fc | renchao_lu | 14 September 2021, 15:58:24 UTC | [PL/CT] solve equation system. | 21 September 2021, 09:45:54 UTC |
| f5a09b5 | renchao_lu | 14 September 2021, 15:56:46 UTC | [PL/CT] add reaction equation local assembler. | 21 September 2021, 09:45:54 UTC |
| d091bb4 | renchao_lu | 14 September 2021, 15:55:14 UTC | [PL/CT] pass equation system. | 21 September 2021, 09:45:54 UTC |
| 905f988 | renchao_lu | 07 September 2021, 10:37:40 UTC | [PL/TimeLoop] solve reaction equation over processes. | 21 September 2021, 09:45:54 UTC |
| 65ef11d | renchao_lu | 07 September 2021, 10:24:44 UTC | [CL] get concentration in the reaction stage. | 21 September 2021, 09:45:54 UTC |
| f87082b | Lars Bilke | 20 September 2021, 13:23:26 UTC | Merge branch 'git-optional' into 'master' [cmake] Make git optional. See merge request ogs/ogs!3783 | 20 September 2021, 13:23:26 UTC |
| ba87dd3 | Lars Bilke | 15 September 2021, 06:33:46 UTC | [cmake] Make git optional. Need to set OGS_VERSION when git is not available. | 20 September 2021, 12:35:05 UTC |
| c1289d5 | Dmitry Yu. Naumov | 20 September 2021, 11:55:59 UTC | Merge branch 'TH2M_small_fix_fatal_report' into 'master' [TH2M/PT] Addition to the error message in case of missing data in the prj-file See merge request ogs/ogs!3790 | 20 September 2021, 11:55:59 UTC |
| a9245df | Norbert Grunwald | 03 September 2021, 09:03:00 UTC | [TH2M/PT] More information in case of ogs_fatal helps to find prj-error | 20 September 2021, 10:45:22 UTC |
| d59411b | Dmitry Yu. Naumov | 20 September 2021, 08:53:11 UTC | Merge branch 'UseLocalInformationForBaseNodeConditions' into 'master' Use local information for base node conditions See merge request ogs/ogs!3786 | 20 September 2021, 08:53:11 UTC |
| 81ee6dd | Dmitry Yu. Naumov | 20 September 2021, 07:40:08 UTC | Merge branch 'SmallFixes' into 'master' Small code improvements - mainly removing unnecessary includes See merge request ogs/ogs!3789 | 20 September 2021, 07:40:08 UTC |
| 4ca900d | Dmitri Naumov | 16 September 2021, 16:23:23 UTC | [App/U] partmesh; Use local info for base nodes. | 20 September 2021, 07:23:15 UTC |
| bcceef9 | Dmitri Naumov | 16 September 2021, 15:16:50 UTC | [MeL] Use local info for detecting base nodes. | 20 September 2021, 07:20:05 UTC |
| 516ed66 | Dmitry Yu. Naumov | 20 September 2021, 07:18:53 UTC | Merge branch 'MeshLibElementCleanup-RefactorNodesConnectedByElements' into 'master' [MeL/Mesh] Improves the memory footprint of the mesh. See merge request ogs/ogs!3785 | 20 September 2021, 07:18:53 UTC |
| a7ff9cf | Thomas Fischer | 09 September 2021, 07:42:02 UTC | [A/U/ModelPreparation] Update copyright. | 20 September 2021, 07:03:02 UTC |
| fb1b397 | Thomas Fischer | 17 September 2021, 10:52:12 UTC | [PL/SurfaceFlux] Rm unused includes Parameter.h, Process.h | 20 September 2021, 07:03:01 UTC |
| ae94515 | Thomas Fischer | 17 September 2021, 10:48:40 UTC | [PL/Output] Rm unused include MathLib/LinAlg/LinAlg.h | 20 September 2021, 07:03:01 UTC |
| f0ff4a0 | Thomas Fischer | 17 September 2021, 10:28:43 UTC | [PL/CT] Remove unused include readMeshFromFile. | 20 September 2021, 07:03:01 UTC |
| 261de7d | Lars Bilke | 20 September 2021, 06:54:14 UTC | [web] Fix wording on download page. Fixes #3196. | 20 September 2021, 06:54:14 UTC |
| e6bbe71 | Dmitri Naumov | 17 September 2021, 11:47:02 UTC | [App/U] Use partition_copy from std ns explicitly. | 17 September 2021, 11:48:18 UTC |
| 23c23f2 | Dmitry Yu. Naumov | 17 September 2021, 09:46:44 UTC | Merge branch 'RM-TEST_thresholds' into 'master' RM Test: slightly change threshold for saturation See merge request ogs/ogs!3787 | 17 September 2021, 09:46:44 UTC |
| e694093 | Jan Thiedau | 17 September 2021, 05:45:50 UTC | RM Test: slightly change threshold for saturation | 17 September 2021, 05:45:50 UTC |
| 01ec9e2 | Thomas Fischer | 16 September 2021, 15:01:20 UTC | [MeL/NodePartitionedMesh] Use fct. calculateNodesConnectedByElements. | 17 September 2021, 04:19:55 UTC |
| 8238eca | Thomas Fischer | 09 July 2021, 14:28:48 UTC | [MeL/Node] Rm node connection information. The connection information can be computed on the fly required. | 17 September 2021, 04:19:55 UTC |
| b7e149c | Thomas Fischer | 09 July 2021, 14:27:27 UTC | [A | MeL | NL | T] Use fct. calculateNodesConnectedByElements. | 17 September 2021, 04:19:55 UTC |
| 97c6b24 | Thomas Fischer | 09 July 2021, 14:25:21 UTC | [MeL/Mesh] Make setNodesConnectedByElements a free fct. Rename setNodesConnectedByElements to calculateNodesConnectedByElements and make it a free function. This 'out sourcing' makes it possible to compute the connection information only when it is required. | 17 September 2021, 04:19:55 UTC |
| f517310 | Dmitry Yu. Naumov | 16 September 2021, 20:30:14 UTC | Merge branch 'PhaseField' into 'master' Phase field-AT1 See merge request ogs/ogs!3779 | 16 September 2021, 20:30:14 UTC |
| 177209a | KeitaYoshioka | 08 September 2021, 15:37:03 UTC | Another model of phasefield (AT1) has been added. | 16 September 2021, 18:40:15 UTC |
| 6a57cea | Dmitry Yu. Naumov | 16 September 2021, 12:29:32 UTC | Merge branch 'doxygen-undoc-param' into 'master' [ci] Catch undocumented parameter in Doxygen output. See merge request ogs/ogs!3784 | 16 September 2021, 12:29:32 UTC |
| 421e76f | Dmitri Naumov | 15 September 2021, 19:53:50 UTC | [docs] Fix ogs_file_param call for doxygen. | 16 September 2021, 11:04:03 UTC |
| cba1123 | Lars Bilke | 15 September 2021, 19:12:58 UTC | [ci] Catch undocumented parameter in Doxygen output. Will mark the job as yellow. | 16 September 2021, 11:04:03 UTC |
| d8159b8 | Dmitry Yu. Naumov | 16 September 2021, 10:18:29 UTC | Merge branch 'TH2M_test_ideal_gas_law' into 'master' TH2M - Ideal gas law compression benchmark See merge request ogs/ogs!3766 | 16 September 2021, 10:18:29 UTC |
| ef9c195 | Dmitry Yu. Naumov | 15 September 2021, 13:13:11 UTC | Merge branch 'localhdf' into 'master' [MeL/IO] HDF5 - Types of Application I/O to Parallel File Systems See merge request ogs/ogs!3764 | 15 September 2021, 13:13:11 UTC |
| d3c0489 | Lars Bilke | 15 September 2021, 13:02:03 UTC | Merge branch 'rpath-fixes' into 'master' [cmake] RPATH fixes Closes #3189 See merge request ogs/ogs!3782 | 15 September 2021, 13:02:03 UTC |
| f7fffbb | Tobias Meisel | 13 September 2021, 08:09:17 UTC | [MeL/IO] HDF: Add tests for multiple file output | 15 September 2021, 12:36:41 UTC |
| 479d08b | Tobias Meisel | 24 August 2021, 14:35:07 UTC | [MeL/IO] HDF: Add option to support writing into mulitple HDF5 files | 15 September 2021, 12:35:41 UTC |
| e09b480 | Lars Bilke | 15 September 2021, 06:30:22 UTC | [cmake] Fix tfel rpath. Fixes #3189. | 15 September 2021, 12:13:11 UTC |
| 1caf73d | Lars Bilke | 15 September 2021, 06:29:48 UTC | [cmake] Append to RPATH instead of overwriting. | 15 September 2021, 06:29:48 UTC |
| 2553cf5 | Norbert Grunwald | 17 August 2021, 11:47:44 UTC | [T/TH2M] Analytical solution of confined cube compression | 13 September 2021, 14:42:44 UTC |
| 0346a2f | Norbert Grunwald | 16 July 2021, 07:07:15 UTC | [T/TH2M] TH confined compression of gas cube Confined compression of a cube, temperature and pressure follow ideal gas law, checks for energy and mass balances. | 13 September 2021, 14:42:44 UTC |
| 7f0c288 | Dmitry Yu. Naumov | 13 September 2021, 13:26:57 UTC | Merge branch 'th2m_fix_composition_output' into 'master' Th2m fix composition output See merge request ogs/ogs!3682 | 13 September 2021, 13:26:57 UTC |
| 9477ea5 | Norbert Grunwald | 09 September 2021, 12:46:32 UTC | update reference files | 13 September 2021, 13:01:21 UTC |
| 035443f | Norbert Grunwald | 30 June 2021, 11:48:30 UTC | update tests to check composition output (xn, xm) | 13 September 2021, 13:01:21 UTC |
| 9739a8d | Norbert Grunwald | 30 June 2021, 11:01:53 UTC | copy constitutive variables into ip_data array | 13 September 2021, 13:01:21 UTC |
| afe5fa7 | Dmitry Yu. Naumov | 09 September 2021, 18:42:07 UTC | Merge branch 'TH2M_ConstantSolidPorosity' into 'master' TH2M: Switch to constant solid volume fraction See merge request ogs/ogs!3777 | 09 September 2021, 18:42:07 UTC |
| d0c8b50 | Dmitri Naumov | 08 September 2021, 19:36:02 UTC | [PL/TH2M] Switch to constant solid volume fraction Updating the results of failed ctests. | 09 September 2021, 13:06:35 UTC |
| bd25372 | Dmitry Yu. Naumov | 09 September 2021, 11:08:04 UTC | Merge branch 'fixing' into 'master' [Test/HT] Increased the tolerance pf the linear solver for H in 2D_ThermalConvection_constviscosityStaggeredScheme Closes #3125 See merge request ogs/ogs!3778 | 09 September 2021, 11:08:04 UTC |
| 41b1844 | Dmitry Yu. Naumov | 09 September 2021, 10:14:32 UTC | Merge branch 'UseTransformAlgorithmForIPIO' into 'master' [PL] Create ip-writer callback in ctor. See merge request ogs/ogs!3774 | 09 September 2021, 10:14:32 UTC |
| 2c2ec83 | Dmitry Yu. Naumov | 09 September 2021, 08:00:43 UTC | Merge branch 'UseCompileTimeMatrixSizes' into 'master' Use compile time known sizes for rotations. See merge request ogs/ogs!3705 | 09 September 2021, 08:00:43 UTC |
| dad1b96 | Wenqing Wang | 09 September 2021, 07:03:29 UTC | [Test/HT] Increased the tolerance pf the linear solver for H in 2D_ThermalConvection_constviscosityStaggeredScheme | 09 September 2021, 07:03:29 UTC |
| 1497297 | Dmitri Naumov | 08 September 2021, 14:02:09 UTC | [T/TH2M] Slightly relax test tolerances. | 08 September 2021, 14:02:09 UTC |
| 49ebc02 | Dmitri Naumov | 14 July 2021, 08:46:44 UTC | Use compile time known sizes for rotations. Follow-up of !3676 "Dropped the rotation of the shape function gradients". | 08 September 2021, 11:37:59 UTC |
| 3eb1899 | Dmitri Naumov | 07 September 2021, 14:00:53 UTC | [PL/RM] Update ip-writer for solid material vars. Reusing the integration point writer constructor's code for the callback. Moving the adding of integration point writers into the common place to avoid future duplications. Unfortunately some adjustments were necessary to the interfaces especially the passing of 'int const&' isn't nice. | 08 September 2021, 10:37:30 UTC |
| 019a486 | Dmitri Naumov | 07 September 2021, 13:56:14 UTC | [PL] Create ip-writer callback in ctor. Moving duplicate code from each process into the constructor of the integration point writer. Also replacing the for-loop with an algorithm. | 08 September 2021, 10:37:30 UTC |
| 7b324f2 | Dmitry Yu. Naumov | 07 September 2021, 19:12:02 UTC | Merge branch 'ip_data_io_fix_TM' into 'master' [TM] Fixed integration point (IP) data IO for restart computation See merge request ogs/ogs!3738 | 07 September 2021, 19:12:02 UTC |
| 8c15f02 | Wenqing Wang | 10 August 2021, 13:32:22 UTC | [TM] Compute eps only if norm(u) is non-zero | 07 September 2021, 11:05:19 UTC |
| 53f0190 | Wenqing Wang | 10 August 2021, 13:18:07 UTC | [TM] Use the same function for eps_m and eps to set/get IP data | 07 September 2021, 11:05:19 UTC |
| 3222581 | Wenqing Wang | 06 August 2021, 07:56:15 UTC | [TM] Perform transpose to IP stress and strain for output. | 07 September 2021, 11:05:19 UTC |
| 7e8be6e | Dmitry Yu. Naumov | 07 September 2021, 11:04:28 UTC | Merge branch 'multimesh_output' into 'master' Multimesh_output See merge request ogs/ogs!3604 | 07 September 2021, 11:04:28 UTC |
| 077dc5d | Dmitry Yu. Naumov | 07 September 2021, 10:15:55 UTC | Merge branch 'SmallFixes' into 'master' Small, unrelated fixes See merge request ogs/ogs!3773 | 07 September 2021, 10:15:55 UTC |
| 1566f1e | Tobias Meisel | 06 September 2021, 11:34:58 UTC | [MeL/IO] HDF/XDMF: New multimesh output tests | 07 September 2021, 09:32:02 UTC |
| 3c136fd | Tobias Meisel | 06 September 2021, 11:34:43 UTC | [MeL/IO] HDF/XDMF: Writer is now able to write multiple meshes and timeseries | 07 September 2021, 09:32:02 UTC |
| 2c95db0 | Dmitry Yu. Naumov | 07 September 2021, 09:05:01 UTC | Merge branch 'CorrectTHMRestart' into 'master' [PL/THM] Initialize local asm's after int points. See merge request ogs/ogs!3742 | 07 September 2021, 09:05:01 UTC |
| 6a5c1d7 | Thomas Fischer | 08 July 2021, 13:01:21 UTC | [MeL] Make class ElementStatus final. | 07 September 2021, 08:51:04 UTC |
| 2b67be8 | Thomas Fischer | 28 July 2021, 10:29:48 UTC | [PL/SurfaceFlux] Make attributes const. | 07 September 2021, 08:51:04 UTC |
| 2eb400d | Thomas Fischer | 29 July 2021, 11:59:53 UTC | [PL/Process] Narrow scope of variable. | 07 September 2021, 08:51:04 UTC |
| 62e8245 | Thomas Fischer | 29 July 2021, 11:59:03 UTC | [PL/Process] Rm. unnecessary line break in docu. | 07 September 2021, 08:51:04 UTC |
| c28ad0e | Thomas Fischer | 28 July 2021, 13:57:36 UTC | [PL] Fix typo in method name. | 07 September 2021, 08:50:58 UTC |
| 0423cbc | Dmitry Yu. Naumov | 07 September 2021, 08:14:15 UTC | [T/THM/BGRa] Relax local Newton tolerance. As suggested in https://gitlab.opengeosys.org/ogs/ogs/-/merge_requests/3742#note_98257 | 07 September 2021, 08:14:15 UTC |
| afd59f1 | Dmitri Naumov | 06 September 2021, 15:41:36 UTC | [T/THM/BGRa] Update reference for corrected ip I/O | 06 September 2021, 15:41:57 UTC |
| 8bf2cc1 | Dmitri Naumov | 26 August 2021, 12:11:32 UTC | [T/THM] Correct ctest name. | 06 September 2021, 15:41:57 UTC |
| b87f1e7 | Dmitri Naumov | 01 August 2021, 11:28:16 UTC | [T/THM/A2] Restart with heating test. | 06 September 2021, 15:41:57 UTC |
| 0a3eafb | Dmitri Naumov | 26 August 2021, 11:37:59 UTC | [T/THM/A2] Update references adding restart data. | 06 September 2021, 15:41:57 UTC |
| 57e6296 | Dmitri Naumov | 02 August 2021, 21:36:21 UTC | [PL/THM] Add epsilon to integration point writers. | 06 September 2021, 15:41:57 UTC |
| 0afce78 | Dmitri Naumov | 02 August 2021, 21:33:44 UTC | [PL/THM] Correct getSigma implementation. | 06 September 2021, 15:41:56 UTC |
| cf7936a | Dmitri Naumov | 30 July 2021, 12:34:48 UTC | [PL/THM] Initialize local asm's after int points. Otherwise the integration point data is not set correctly for restart. | 06 September 2021, 15:41:56 UTC |
| 033657c | Dmitry Yu. Naumov | 06 September 2021, 15:25:59 UTC | Merge branch 'PhaseField' into 'master' Phase field with constrained minimisation See merge request ogs/ogs!3749 | 06 September 2021, 15:25:59 UTC |
| 1e2694e | Dmitri Naumov | 06 September 2021, 09:27:25 UTC | [T/PhF] Remove old unused project files. | 06 September 2021, 13:52:16 UTC |
| e1bd311 | KeitaYoshioka | 06 September 2021, 09:45:36 UTC | [T/PhF] Add a AT2 iso tensile ctest. | 06 September 2021, 13:52:16 UTC |
