| f8eb3fa | Dmitri Naumov | 09 March 2021, 11:17:46 UTC | [T/RM] Relax tolerances for failing CI job. frontend | 09 March 2021, 11:17:46 UTC |
| 5907ba7 | Dmitry Yu. Naumov | 09 March 2021, 10:41:21 UTC | Merge branch 'RMFixesAndCleanups' into 'master' RM fixes and cleanups See merge request ogs/ogs!3477 | 09 March 2021, 10:41:21 UTC |
| 9816d02 | Dmitri Naumov | 08 March 2021, 14:34:27 UTC | [PL/RM] Fix eps_m computation in initialization. From the equations we have eps = eps_{m} + eps_{sw}, with eps_{sw} = -C_el^{-1} sigma_{sw}. All other places are using correct sign. | 09 March 2021, 09:17:26 UTC |
| eacfb89 | Dmitri Naumov | 08 March 2021, 13:34:28 UTC | [PL/RM] Assemble. Compute p_SR before usage in rho solid_grain_pressure used in some density models was not set and caused an access error in the ExponentialProperty. | 09 March 2021, 09:17:26 UTC |
| 84bb557 | Dmitri Naumov | 22 February 2021, 17:04:40 UTC | [T/RM] Add liakopoulos test using assemble(). Using central differences for Jacobian computation. Still the HydraulicFlow and Nodal forces are not correct and don't include the 'M \dot{x} + K x' part. | 09 March 2021, 09:17:26 UTC |
| 4712e90 | Dmitri Naumov | 01 March 2021, 12:20:03 UTC | [T/RM] Move Liakopoulos diff config into project. | 09 March 2021, 09:17:26 UTC |
| 6fceafa | Dmitri Naumov | 22 February 2021, 17:03:43 UTC | [PL/RM] Use initial stress in assemble(). | 09 March 2021, 09:17:26 UTC |
| c103065 | Dmitri Naumov | 21 February 2021, 20:35:30 UTC | [PL/RM] Fix error in mechanical strain computation Only happened in the assemble function, which does not have a ctest with swelling. | 09 March 2021, 09:17:26 UTC |
| 019f776 | Dmitri Naumov | 21 February 2021, 20:34:29 UTC | [PL/RM] Reuse p_FR computation in asm w/ Jacobian. | 09 March 2021, 09:17:26 UTC |
| 480f6b8 | Dmitri Naumov | 01 March 2021, 15:25:50 UTC | [PL/RM] Remove incorrect comment in assemble(). | 09 March 2021, 09:17:26 UTC |
| 93fe62d | Lars Bilke | 09 March 2021, 08:43:58 UTC | Update Dependencies.cmake (follow-up on !3494) | 09 March 2021, 08:43:58 UTC |
| 6dc675f | Lars Bilke | 08 March 2021, 20:23:13 UTC | Merge branch 'more-cpm' into 'master' More Conan packages moved to CPM (2nd try) See merge request ogs/ogs!3494 | 08 March 2021, 20:23:13 UTC |
| 8a563f7 | Lars Bilke | 08 March 2021, 13:48:22 UTC | [cpm] Suppress tests from dependencies. | 08 March 2021, 19:43:09 UTC |
| 47efb43 | Lars Bilke | 08 March 2021, 13:08:39 UTC | [cmake] Cleanup. | 08 March 2021, 19:43:09 UTC |
| 7095bad | Lars Bilke | 24 February 2021, 08:56:19 UTC | [cpm] Update to 0.31.1 | 08 March 2021, 19:43:09 UTC |
| a61d381 | Lars Bilke | 24 February 2021, 09:24:19 UTC | Fixed testrunner with mfront. | 08 March 2021, 19:43:09 UTC |
| 710adbb | Lars Bilke | 24 February 2021, 08:24:27 UTC | Added zlib as CPM package. | 08 March 2021, 19:43:09 UTC |
| 7c4c60d | Lars Bilke | 08 March 2021, 09:25:23 UTC | [cpm] Added EXCLUDE_FROM_ALL. | 08 March 2021, 19:43:09 UTC |
| cb89dc6 | Lars Bilke | 23 February 2021, 14:23:00 UTC | [CMake] Renamed BUILD_TESTING to OGS_BUILD_TESTING. Does not interfere with CPM modules. | 08 March 2021, 19:43:09 UTC |
| eadd377 | Lars Bilke | 23 February 2021, 09:51:53 UTC | [CMake] Flag -fext-numeric-literals is valid only for C++. | 08 March 2021, 19:43:09 UTC |
| 6a1ab25 | Lars Bilke | 23 February 2021, 09:13:00 UTC | [CMake] package target installs only ogs, no third-party. - Removed install COMPONENTs - Made ogs the default component name - Install only the default ogs component with CPack | 08 March 2021, 19:43:09 UTC |
| 21efc68 | Lars Bilke | 24 February 2021, 14:01:35 UTC | [cpm] Fix frontend. | 08 March 2021, 19:43:09 UTC |
| f13830d | Dmitry Yu. Naumov | 08 March 2021, 15:04:34 UTC | Merge branch 'web-additions' into 'master' Some web doc additions See merge request ogs/ogs!3493 | 08 March 2021, 15:04:34 UTC |
| 78d85f4 | Dmitry Yu. Naumov | 08 March 2021, 14:16:29 UTC | Merge branch 'Gmsh2OgsExtractBoundary' into 'master' GMSH2OGS; extract boundary meshes See merge request ogs/ogs!3482 | 08 March 2021, 14:16:29 UTC |
| 7b09b6d | Lars Bilke | 24 February 2021, 11:12:05 UTC | [cpm] Fixed hdf5 found on system. | 08 March 2021, 13:08:47 UTC |
| 2b76136 | Lars Bilke | 08 March 2021, 13:03:44 UTC | [web] Fixed singularity docs. Thanks to Shuang for reporting. | 08 March 2021, 13:03:44 UTC |
| 63005e5 | Dmitri Naumov | 04 March 2021, 08:52:46 UTC | [T/App/U] Add GMSH2OGS snakemake ctest. Testing conversion of the gmsh file removing the line elements from the boundary and extracting them as additional boundary files. | 08 March 2021, 12:21:22 UTC |
| dd88ec0 | Dmitri Naumov | 06 March 2021, 11:29:10 UTC | [web] GMSH2OGS documentation for -e and -b. | 08 March 2021, 12:21:22 UTC |
| 2453d1e | Dmitri Naumov | 03 March 2021, 17:34:40 UTC | [T/MeL] Reference files for GMSH2OGS boundaries. | 08 March 2021, 12:21:22 UTC |
| 7f22968 | Dmitri Naumov | 04 March 2021, 16:14:17 UTC | [GL] Grid; Allow zero tolerance to be used. Specifying strictly smaller criterion, does not allow eps=0 to be used. | 08 March 2021, 12:21:22 UTC |
| 77a0920 | Dmitri Naumov | 04 March 2021, 11:06:18 UTC | [App/U] Create bulk_node_ids/element_ids. Using exact matching. If the utility would be called gmsh2vtu, then this identification would be outsourced (identifySubdomains tool). Now the user expects proper OGS-usable boundary meshes to be generated. | 08 March 2021, 12:21:22 UTC |
| d3d08bb | Lars Bilke | 23 February 2021, 07:50:06 UTC | Replaced Conan CVode module with CPM. | 08 March 2021, 12:17:06 UTC |
| 30ee303 | Lars Bilke | 23 February 2021, 07:22:56 UTC | Replaced LibXml2 Conan module with CPM. | 08 March 2021, 12:17:06 UTC |
| e7d24af | Dmitri Naumov | 24 February 2021, 16:37:21 UTC | [App/U] GMSH2OGS can now extract line boundaries. Adding a new command line flag '-b'. With the flag being set, the line elements (same as those removed by the '-e' flag) are extracted as individual meshes. The new meshes are stored in files corresponding to the material ids. | 08 March 2021, 12:12:19 UTC |
| 66b9434 | Dmitri Naumov | 03 March 2021, 15:38:00 UTC | [MeL] Extract marking of unused nodes and deletion For external usage. | 08 March 2021, 12:12:19 UTC |
| dd7f53a | Dmitri Naumov | 03 March 2021, 14:23:48 UTC | [App/U] Fix memory info message type and prefix. | 08 March 2021, 12:12:19 UTC |
| 42db96b | Lars Bilke | 22 February 2021, 14:17:06 UTC | Replaced hdf5 Conan module with CPM. | 08 March 2021, 11:31:53 UTC |
| 6ebfe9a | Lars Bilke | 22 February 2021, 13:09:17 UTC | Replaced Conan shapelib with CPM. Is enabled when OGS_BUILD_GUI=ON | 08 March 2021, 11:31:53 UTC |
| dc29d29 | Lars Bilke | 22 February 2021, 09:43:08 UTC | Install Boost via CPM. | 08 March 2021, 11:31:52 UTC |
| d93b2a6 | Dmitry Yu. Naumov | 08 March 2021, 10:42:12 UTC | Merge branch 'FixGrowingMemConsumption' into 'master' Fix growing mem consumption See merge request ogs/ogs!3492 | 08 March 2021, 10:42:12 UTC |
| 8d52068 | Lars Bilke | 08 March 2021, 08:16:25 UTC | [web] Added page on Snakemake workflow usage. | 08 March 2021, 08:37:48 UTC |
| d88df1e | Lars Bilke | 08 March 2021, 08:15:36 UTC | [web] Added some notes on ccache usage. Thanks for Alireza for reporting! | 08 March 2021, 08:15:36 UTC |
| 7503abe | Thomas Fischer | 04 March 2021, 13:30:16 UTC | [PL/TimeLoop] Store the ids of xdot GlobalVector's. | 08 March 2021, 05:51:01 UTC |
| 6a569b4 | Thomas Fischer | 04 March 2021, 13:28:41 UTC | [NL/DOF] Rm getVector() method to avoid misuse. | 06 March 2021, 14:44:42 UTC |
| 0fe8217 | Thomas Fischer | 04 March 2021, 13:26:03 UTC | [NL/ODESolver/Newton] Store ids to reuse the xdot vectors. | 06 March 2021, 14:44:39 UTC |
| aa7ecc9 | Thomas Fischer | 04 March 2021, 13:24:40 UTC | [NL/ODESolver/Newton] Store ids to reuse the xdot vectors. | 06 March 2021, 14:44:33 UTC |
| 74c93ec | Thomas Fischer | 04 March 2021, 13:24:05 UTC | [NL/ODESolver/Picard] Store ids to reuse the xdot vectors. | 06 March 2021, 14:44:24 UTC |
| a22b51d | Dmitry Yu. Naumov | 05 March 2021, 14:24:32 UTC | Merge branch 'TRM_THM_update' into 'master' Update the solid thermal expansion calculation in THM and TRM See merge request ogs/ogs!3483 | 05 March 2021, 14:24:32 UTC |
| 650273d | Lars Bilke | 05 March 2021, 09:20:21 UTC | Merge branch 'snakemake-vtkdiff-followup' into 'master' [T] Rule output to stdout in Snakemake. See merge request ogs/ogs!3488 | 05 March 2021, 09:20:21 UTC |
| 91eb420 | Wenqing Wang | 03 March 2021, 16:21:23 UTC | [TRM] Updated the solid thermal expansivity calculation | 05 March 2021, 08:22:51 UTC |
| 5115453 | Wenqing Wang | 03 March 2021, 16:21:08 UTC | [THM] Updated the solid thermal expansivity calculation | 05 March 2021, 08:20:41 UTC |
| 92e636e | Lars Bilke | 05 March 2021, 08:19:42 UTC | [T] Rule output to stdout in Snakemake. Generalized generate_square_mesh output file name. | 05 March 2021, 08:19:42 UTC |
| 9da7dc6 | Dmitry Yu. Naumov | 04 March 2021, 18:21:19 UTC | Merge branch 'snakemake-vtkdiff' into 'master' Small Snakemake refactorings See merge request ogs/ogs!3487 | 04 March 2021, 18:21:19 UTC |
| 48cdafa | Lars Bilke | 04 March 2021, 15:47:58 UTC | [T] Extracted snakemake rule generate_square_mesh. | 04 March 2021, 15:47:58 UTC |
| d7f55ed | Dmitry Yu. Naumov | 04 March 2021, 14:18:23 UTC | Merge branch 'doxy-defines' into 'master' [doxygen] Added preprocessor macros to complete docs. See merge request ogs/ogs!3486 | 04 March 2021, 14:18:23 UTC |
| f092a26 | Lars Bilke | 04 March 2021, 14:00:54 UTC | [T] Use vtkdiff wrapper in VoxelGridFromLayers.smk. | 04 March 2021, 14:00:54 UTC |
| 5c3e978 | Lars Bilke | 04 March 2021, 13:54:19 UTC | [T] Made Snakemake vtkdiff wrapper more generic. Files to compare have to specified explicitly. Added check_mesh option. | 04 March 2021, 13:54:19 UTC |
| 96cd959 | Lars Bilke | 04 March 2021, 12:52:59 UTC | [doxygen] Added preprocessor macros to complete docs. | 04 March 2021, 12:52:59 UTC |
| 6b3b0bd | Dmitry Yu. Naumov | 04 March 2021, 11:13:57 UTC | Merge branch 'THM_fixing' into 'master' [THM] Removed the double declared VariableArray See merge request ogs/ogs!3485 | 04 March 2021, 11:13:57 UTC |
| 1dc27da | Wenqing Wang | 04 March 2021, 08:31:20 UTC | [THM] Removed the double declared VariableArray | 04 March 2021, 08:31:20 UTC |
| 9c1e1b1 | Lars Bilke | 03 March 2021, 11:03:56 UTC | Merge branch 'GhostPartitioningFix' into 'master' [A/U/MP] Correct ghost element information. See merge request ogs/ogs!3481 | 03 March 2021, 11:03:56 UTC |
| 99b500f | Lars Bilke | 03 March 2021, 11:03:22 UTC | Merge branch 'AddFaultToVoxelGrid-workflow' into 'master' Add fault to voxel grid workflow Closes #3103 See merge request ogs/ogs!3470 | 03 March 2021, 11:03:22 UTC |
| 7c5d6ad | Dmitry Yu. Naumov | 03 March 2021, 09:27:50 UTC | Merge branch 'ExcludeDepsFromWarnings' into 'master' Exclude _deps directory from warnings check. See merge request ogs/ogs!3478 | 03 March 2021, 09:27:50 UTC |
| cd2a40b | Thomas Fischer | 03 March 2021, 07:37:11 UTC | [Tests/Data] Fix of ghost data requires update. | 03 March 2021, 08:54:19 UTC |
| 540d0b4 | Lars Bilke | 26 February 2021, 14:04:04 UTC | [T] Replaced AddFaultToVoxelGrid tests with workflow. | 03 March 2021, 08:38:55 UTC |
| fcc5c8a | Thomas Fischer | 24 February 2021, 06:34:42 UTC | [A/U/MP] Correct ghost element information. | 03 March 2021, 05:44:12 UTC |
| e225681 | Dmitri Naumov | 01 March 2021, 22:12:09 UTC | Exclude _deps directory from warnings check. Now this includes the submodules, which are essentially system includes. | 02 March 2021, 22:50:05 UTC |
| a5442d7 | Lars Bilke | 02 March 2021, 21:01:01 UTC | Merge branch 'DoxygenFixes' into 'master' Doxygen fixes See merge request ogs/ogs!3474 | 02 March 2021, 21:01:01 UTC |
| 96780f6 | Lars Bilke | 02 March 2021, 19:47:10 UTC | [ci] Fix check header job | 02 March 2021, 19:47:10 UTC |
| 0af78e8 | Dmitry Yu. Naumov | 02 March 2021, 19:26:23 UTC | Merge branch 'FixSpellingMistakes' into 'master' Fix spelling mistakes. See merge request ogs/ogs!3472 | 02 March 2021, 19:26:23 UTC |
| 0b50451 | Dmitry Yu. Naumov | 02 March 2021, 18:08:29 UTC | Merge branch 'FixALargeCTestTolerance' into 'master' [T/HM] Slightly relax tolerance for sigma. See merge request ogs/ogs!3480 | 02 March 2021, 18:08:29 UTC |
| ae85674 | Dmitri Naumov | 02 March 2021, 17:32:47 UTC | [T/HM] Slightly relax tolerance for sigma. | 02 March 2021, 17:32:47 UTC |
| 635275d | Dmitri Naumov | 02 March 2021, 17:12:37 UTC | [App/IO] Use English in comments. | 02 March 2021, 17:14:46 UTC |
| 9743a42 | Lars Bilke | 02 March 2021, 14:23:11 UTC | [ci] Added codespell check to pre-commit. | 02 March 2021, 17:14:46 UTC |
| 2864654 | Dmitri Naumov | 28 February 2021, 17:47:47 UTC | Fix spelling mistakes. | 02 March 2021, 17:14:46 UTC |
| ed4b925 | Dmitry Yu. Naumov | 02 March 2021, 13:58:43 UTC | Merge branch 'BHE_array_2D' into 'master' Update the python script for the BHE Array 2D benchmark See merge request ogs/ogs!3475 | 02 March 2021, 13:58:43 UTC |
| e245bab | Lars Bilke | 02 March 2021, 13:53:47 UTC | Merge branch 'ci-fix-artifacts' into 'master' [ci] Fixed correct artifact archival. See merge request ogs/ogs!3479 | 02 March 2021, 13:53:47 UTC |
| 728a16d | Lars Bilke | 02 March 2021, 08:18:29 UTC | [ci] Fixed correct artifact archival. | 02 March 2021, 13:20:50 UTC |
| 312fdf9 | Shuang Chen | 01 March 2021, 13:52:50 UTC | [HC/docu] fixed the input parameter typo and equation format errors | 02 March 2021, 11:29:31 UTC |
| bbe08c2 | Shuang Chen | 01 March 2021, 13:48:19 UTC | [HC/script] update the python script of the analytical solver for the BHE array benchmark | 02 March 2021, 11:29:31 UTC |
| 1c17b1e | Dmitry Yu. Naumov | 01 March 2021, 22:08:11 UTC | Merge branch 'ConstraintProcessVariables' into 'master' Update PETSc SNES solver and add I/F for constraint variables. See merge request ogs/ogs!3468 | 01 March 2021, 22:08:11 UTC |
| d0b959f | Dmitri Naumov | 01 March 2021, 13:45:13 UTC | [PL] HM/TM; Fix parameter names in docu. | 01 March 2021, 22:05:39 UTC |
| 11f8aa7 | Dmitri Naumov | 01 March 2021, 13:44:37 UTC | [MatL] KozenyCarman; Add opening latex formula tag | 01 March 2021, 22:05:39 UTC |
| 8840359 | Dmitri Naumov | 01 December 2020, 22:32:42 UTC | [NL] SNES; Nonlinear solver prefix and maxiter. | 01 March 2021, 21:30:06 UTC |
| fc4633a | Dmitri Naumov | 26 November 2020, 14:13:13 UTC | [NL] SNES; Add finalizeAssembly call for r too. | 01 March 2021, 21:30:06 UTC |
| 15bb33b | Dmitry Yu. Naumov | 23 August 2018, 16:45:33 UTC | [NL] SNES; Fix application of Dirichlet BCs. | 01 March 2021, 21:30:06 UTC |
| 847e2eb | Dmitri Naumov | 08 March 2018, 12:02:09 UTC | [NL] SNES Add inequality constraints callback. This allows a process to set lower or upper bounds to the solution vector for SNESVI solvers. Only two types of SNES solver support this. | 01 March 2021, 21:30:06 UTC |
| dad7c47 | Dmitri Naumov | 01 February 2018, 17:07:33 UTC | [T] Use PETSc SNES NLS in mechanics ctests. | 01 March 2021, 21:30:06 UTC |
| 45e4102 | Dmitry Yu. Naumov | 01 March 2021, 16:57:55 UTC | Merge branch 'PoreDiffusion' into 'master' [PL/CT] Replaced molecular diffusion with pore diffusion See merge request ogs/ogs!3467 | 01 March 2021, 16:57:55 UTC |
| 7afa220 | renchao_lu | 01 March 2021, 11:36:34 UTC | [T] Relax absolute tolerance. | 01 March 2021, 14:53:08 UTC |
| e72dc4f | renchao_lu | 25 February 2021, 11:07:50 UTC | [T] Update .prj files. | 01 March 2021, 14:53:08 UTC |
| 385f01a | renchao_lu | 25 February 2021, 10:54:38 UTC | [PL/CT] Rename as pore diffusion. | 01 March 2021, 14:53:08 UTC |
| b90fb0f | renchao_lu | 25 February 2021, 09:27:53 UTC | [MPL] Separate out pore diffusion. | 01 March 2021, 14:53:08 UTC |
| 912c7dd | Lars Bilke | 01 March 2021, 14:30:14 UTC | Merge branch 'update-conan' into 'master' Bumped minimum Conan to 1.33.0 See merge request ogs/ogs!3473 | 01 March 2021, 14:30:14 UTC |
| d159997 | Dmitry Yu. Naumov | 01 March 2021, 13:51:45 UTC | Merge branch 'out-of-source' into 'master' Change back to out-of-source builds See merge request ogs/ogs!3466 | 01 March 2021, 13:51:45 UTC |
| 0be9bcb | Lars Bilke | 01 March 2021, 08:30:45 UTC | [ci] Fix frontend job. | 01 March 2021, 13:30:26 UTC |
| e7d497e | Lars Bilke | 26 February 2021, 07:54:10 UTC | [pre-commit] Ignore ci configs in check-yaml. | 01 March 2021, 13:30:26 UTC |
| edcf3f9 | Lars Bilke | 26 February 2021, 07:52:16 UTC | Update pre-commit hooks. | 01 March 2021, 13:30:26 UTC |
| a985ade | Lars Bilke | 26 February 2021, 07:24:08 UTC | [ci] Fix coverage. | 01 March 2021, 13:30:26 UTC |
| c7eceda | Lars Bilke | 25 February 2021, 14:38:26 UTC | [ci] Symlink build dir. | 01 March 2021, 13:30:26 UTC |
