| 3e170d6 | Dmitri Naumov | 10 March 2021, 10:05:23 UTC | [T/RM] Update reference. Rhs includes stresses. In 6fceafaed "[PL/RM] Use initial stress in assemble()." the rhs vector was changed, now including also stress related parts, and not only the gravitational forces. This changes only the NodalForces output, everything else is exactly same as before. | 10 March 2021, 12:34:28 UTC |
| 72d80ab | Lars Bilke | 09 March 2021, 21:20:45 UTC | Merge branch 'cpm-fixes' into 'master' [cpm] Boost header only and skip formatting targets See merge request ogs/ogs!3501 | 09 March 2021, 21:20:45 UTC |
| 707e3aa | Lars Bilke | 09 March 2021, 20:25:13 UTC | [cpm] Add Boost as header-only. | 09 March 2021, 20:25:13 UTC |
| e2971c9 | Lars Bilke | 09 March 2021, 20:24:48 UTC | [CMake] Disable formatting targets when formatters not found. | 09 March 2021, 20:24:48 UTC |
| 2958a5a | Lars Bilke | 09 March 2021, 19:59:36 UTC | Merge branch 'ReaddCleanCoverageTarget' into 'master' [CMake] Added clean_coverage target. See merge request ogs/ogs!3499 | 09 March 2021, 19:59:36 UTC |
| 0323857 | Lars Bilke | 09 March 2021, 19:57:07 UTC | Merge branch 'fix-shapelib' into 'master' [cpm] Fixed shapelib used from system See merge request ogs/ogs!3500 | 09 March 2021, 19:57:07 UTC |
| 670c6ae | Lars Bilke | 09 March 2021, 19:17:41 UTC | [cpm] Fixed shapelib used from system. | 09 March 2021, 19:17:41 UTC |
| b1fec71 | Dmitry Yu. Naumov | 09 March 2021, 14:57:51 UTC | Merge branch 'CIFixTolerancesRMLiakopoulosQN' into 'master' [T/RM] Relax tolerances for failing CI job. See merge request ogs/ogs!3497 | 09 March 2021, 14:57:51 UTC |
| 2337827 | Lars Bilke | 12 February 2019, 08:09:25 UTC | [CMake] Added clean_coverage target. | 09 March 2021, 14:37:59 UTC |
| c449fe1 | Dmitri Naumov | 09 March 2021, 13:48:03 UTC | [T/RM] Relax tolerances for failing CI job. win | 09 March 2021, 13:48:03 UTC |
| eb24866 | Lars Bilke | 09 March 2021, 13:13:04 UTC | Merge branch 'format' into 'master' Clang and CMake Format preparation See merge request ogs/ogs!3496 | 09 March 2021, 13:13:04 UTC |
| 22144d0 | Lars Bilke | 09 March 2021, 12:14:37 UTC | [web] Added docs on cmake-format. | 09 March 2021, 12:14:37 UTC |
| 38f6285 | Lars Bilke | 09 March 2021, 12:00:32 UTC | [cmake] Preserve comment formating. | 09 March 2021, 12:02:20 UTC |
| 7a5e745 | Lars Bilke | 09 March 2021, 09:09:51 UTC | [cmake-format] Added config file. | 09 March 2021, 12:02:20 UTC |
| 2fea938 | Lars Bilke | 09 March 2021, 08:48:02 UTC | [clang-format] Ignore directories. | 09 March 2021, 12:02:19 UTC |
| ddde0cf | Lars Bilke | 09 March 2021, 08:47:30 UTC | Added Format.cmake | 09 March 2021, 12:02:19 UTC |
| ee07571 | Dmitry Yu. Naumov | 09 March 2021, 11:53:26 UTC | Merge branch 'CIFixTolerancesRMLiakopoulosQN' into 'master' [T/RM] Relax tolerances for failing CI job. See merge request ogs/ogs!3495 | 09 March 2021, 11:53:26 UTC |
| f8eb3fa | Dmitri Naumov | 09 March 2021, 11:17:46 UTC | [T/RM] Relax tolerances for failing CI job. frontend | 09 March 2021, 11:17:46 UTC |
| 5907ba7 | Dmitry Yu. Naumov | 09 March 2021, 10:41:21 UTC | Merge branch 'RMFixesAndCleanups' into 'master' RM fixes and cleanups See merge request ogs/ogs!3477 | 09 March 2021, 10:41:21 UTC |
| 9816d02 | Dmitri Naumov | 08 March 2021, 14:34:27 UTC | [PL/RM] Fix eps_m computation in initialization. From the equations we have eps = eps_{m} + eps_{sw}, with eps_{sw} = -C_el^{-1} sigma_{sw}. All other places are using correct sign. | 09 March 2021, 09:17:26 UTC |
| eacfb89 | Dmitri Naumov | 08 March 2021, 13:34:28 UTC | [PL/RM] Assemble. Compute p_SR before usage in rho solid_grain_pressure used in some density models was not set and caused an access error in the ExponentialProperty. | 09 March 2021, 09:17:26 UTC |
| 84bb557 | Dmitri Naumov | 22 February 2021, 17:04:40 UTC | [T/RM] Add liakopoulos test using assemble(). Using central differences for Jacobian computation. Still the HydraulicFlow and Nodal forces are not correct and don't include the 'M \dot{x} + K x' part. | 09 March 2021, 09:17:26 UTC |
| 4712e90 | Dmitri Naumov | 01 March 2021, 12:20:03 UTC | [T/RM] Move Liakopoulos diff config into project. | 09 March 2021, 09:17:26 UTC |
| 6fceafa | Dmitri Naumov | 22 February 2021, 17:03:43 UTC | [PL/RM] Use initial stress in assemble(). | 09 March 2021, 09:17:26 UTC |
| c103065 | Dmitri Naumov | 21 February 2021, 20:35:30 UTC | [PL/RM] Fix error in mechanical strain computation Only happened in the assemble function, which does not have a ctest with swelling. | 09 March 2021, 09:17:26 UTC |
| 019f776 | Dmitri Naumov | 21 February 2021, 20:34:29 UTC | [PL/RM] Reuse p_FR computation in asm w/ Jacobian. | 09 March 2021, 09:17:26 UTC |
| 480f6b8 | Dmitri Naumov | 01 March 2021, 15:25:50 UTC | [PL/RM] Remove incorrect comment in assemble(). | 09 March 2021, 09:17:26 UTC |
| 93fe62d | Lars Bilke | 09 March 2021, 08:43:58 UTC | Update Dependencies.cmake (follow-up on !3494) | 09 March 2021, 08:43:58 UTC |
| 6dc675f | Lars Bilke | 08 March 2021, 20:23:13 UTC | Merge branch 'more-cpm' into 'master' More Conan packages moved to CPM (2nd try) See merge request ogs/ogs!3494 | 08 March 2021, 20:23:13 UTC |
| 8a563f7 | Lars Bilke | 08 March 2021, 13:48:22 UTC | [cpm] Suppress tests from dependencies. | 08 March 2021, 19:43:09 UTC |
| 47efb43 | Lars Bilke | 08 March 2021, 13:08:39 UTC | [cmake] Cleanup. | 08 March 2021, 19:43:09 UTC |
| 7095bad | Lars Bilke | 24 February 2021, 08:56:19 UTC | [cpm] Update to 0.31.1 | 08 March 2021, 19:43:09 UTC |
| a61d381 | Lars Bilke | 24 February 2021, 09:24:19 UTC | Fixed testrunner with mfront. | 08 March 2021, 19:43:09 UTC |
| 710adbb | Lars Bilke | 24 February 2021, 08:24:27 UTC | Added zlib as CPM package. | 08 March 2021, 19:43:09 UTC |
| 7c4c60d | Lars Bilke | 08 March 2021, 09:25:23 UTC | [cpm] Added EXCLUDE_FROM_ALL. | 08 March 2021, 19:43:09 UTC |
| cb89dc6 | Lars Bilke | 23 February 2021, 14:23:00 UTC | [CMake] Renamed BUILD_TESTING to OGS_BUILD_TESTING. Does not interfere with CPM modules. | 08 March 2021, 19:43:09 UTC |
| eadd377 | Lars Bilke | 23 February 2021, 09:51:53 UTC | [CMake] Flag -fext-numeric-literals is valid only for C++. | 08 March 2021, 19:43:09 UTC |
| 6a1ab25 | Lars Bilke | 23 February 2021, 09:13:00 UTC | [CMake] package target installs only ogs, no third-party. - Removed install COMPONENTs - Made ogs the default component name - Install only the default ogs component with CPack | 08 March 2021, 19:43:09 UTC |
| 21efc68 | Lars Bilke | 24 February 2021, 14:01:35 UTC | [cpm] Fix frontend. | 08 March 2021, 19:43:09 UTC |
| f13830d | Dmitry Yu. Naumov | 08 March 2021, 15:04:34 UTC | Merge branch 'web-additions' into 'master' Some web doc additions See merge request ogs/ogs!3493 | 08 March 2021, 15:04:34 UTC |
| 78d85f4 | Dmitry Yu. Naumov | 08 March 2021, 14:16:29 UTC | Merge branch 'Gmsh2OgsExtractBoundary' into 'master' GMSH2OGS; extract boundary meshes See merge request ogs/ogs!3482 | 08 March 2021, 14:16:29 UTC |
| 7b09b6d | Lars Bilke | 24 February 2021, 11:12:05 UTC | [cpm] Fixed hdf5 found on system. | 08 March 2021, 13:08:47 UTC |
| 2b76136 | Lars Bilke | 08 March 2021, 13:03:44 UTC | [web] Fixed singularity docs. Thanks to Shuang for reporting. | 08 March 2021, 13:03:44 UTC |
| 63005e5 | Dmitri Naumov | 04 March 2021, 08:52:46 UTC | [T/App/U] Add GMSH2OGS snakemake ctest. Testing conversion of the gmsh file removing the line elements from the boundary and extracting them as additional boundary files. | 08 March 2021, 12:21:22 UTC |
| dd88ec0 | Dmitri Naumov | 06 March 2021, 11:29:10 UTC | [web] GMSH2OGS documentation for -e and -b. | 08 March 2021, 12:21:22 UTC |
| 2453d1e | Dmitri Naumov | 03 March 2021, 17:34:40 UTC | [T/MeL] Reference files for GMSH2OGS boundaries. | 08 March 2021, 12:21:22 UTC |
| 7f22968 | Dmitri Naumov | 04 March 2021, 16:14:17 UTC | [GL] Grid; Allow zero tolerance to be used. Specifying strictly smaller criterion, does not allow eps=0 to be used. | 08 March 2021, 12:21:22 UTC |
| 77a0920 | Dmitri Naumov | 04 March 2021, 11:06:18 UTC | [App/U] Create bulk_node_ids/element_ids. Using exact matching. If the utility would be called gmsh2vtu, then this identification would be outsourced (identifySubdomains tool). Now the user expects proper OGS-usable boundary meshes to be generated. | 08 March 2021, 12:21:22 UTC |
| d3d08bb | Lars Bilke | 23 February 2021, 07:50:06 UTC | Replaced Conan CVode module with CPM. | 08 March 2021, 12:17:06 UTC |
| 30ee303 | Lars Bilke | 23 February 2021, 07:22:56 UTC | Replaced LibXml2 Conan module with CPM. | 08 March 2021, 12:17:06 UTC |
| e7d24af | Dmitri Naumov | 24 February 2021, 16:37:21 UTC | [App/U] GMSH2OGS can now extract line boundaries. Adding a new command line flag '-b'. With the flag being set, the line elements (same as those removed by the '-e' flag) are extracted as individual meshes. The new meshes are stored in files corresponding to the material ids. | 08 March 2021, 12:12:19 UTC |
| 66b9434 | Dmitri Naumov | 03 March 2021, 15:38:00 UTC | [MeL] Extract marking of unused nodes and deletion For external usage. | 08 March 2021, 12:12:19 UTC |
| dd7f53a | Dmitri Naumov | 03 March 2021, 14:23:48 UTC | [App/U] Fix memory info message type and prefix. | 08 March 2021, 12:12:19 UTC |
| 42db96b | Lars Bilke | 22 February 2021, 14:17:06 UTC | Replaced hdf5 Conan module with CPM. | 08 March 2021, 11:31:53 UTC |
| 6ebfe9a | Lars Bilke | 22 February 2021, 13:09:17 UTC | Replaced Conan shapelib with CPM. Is enabled when OGS_BUILD_GUI=ON | 08 March 2021, 11:31:53 UTC |
| dc29d29 | Lars Bilke | 22 February 2021, 09:43:08 UTC | Install Boost via CPM. | 08 March 2021, 11:31:52 UTC |
| d93b2a6 | Dmitry Yu. Naumov | 08 March 2021, 10:42:12 UTC | Merge branch 'FixGrowingMemConsumption' into 'master' Fix growing mem consumption See merge request ogs/ogs!3492 | 08 March 2021, 10:42:12 UTC |
| 8d52068 | Lars Bilke | 08 March 2021, 08:16:25 UTC | [web] Added page on Snakemake workflow usage. | 08 March 2021, 08:37:48 UTC |
| d88df1e | Lars Bilke | 08 March 2021, 08:15:36 UTC | [web] Added some notes on ccache usage. Thanks for Alireza for reporting! | 08 March 2021, 08:15:36 UTC |
| 7503abe | Thomas Fischer | 04 March 2021, 13:30:16 UTC | [PL/TimeLoop] Store the ids of xdot GlobalVector's. | 08 March 2021, 05:51:01 UTC |
| 6a569b4 | Thomas Fischer | 04 March 2021, 13:28:41 UTC | [NL/DOF] Rm getVector() method to avoid misuse. | 06 March 2021, 14:44:42 UTC |
| 0fe8217 | Thomas Fischer | 04 March 2021, 13:26:03 UTC | [NL/ODESolver/Newton] Store ids to reuse the xdot vectors. | 06 March 2021, 14:44:39 UTC |
| aa7ecc9 | Thomas Fischer | 04 March 2021, 13:24:40 UTC | [NL/ODESolver/Newton] Store ids to reuse the xdot vectors. | 06 March 2021, 14:44:33 UTC |
| 74c93ec | Thomas Fischer | 04 March 2021, 13:24:05 UTC | [NL/ODESolver/Picard] Store ids to reuse the xdot vectors. | 06 March 2021, 14:44:24 UTC |
| a22b51d | Dmitry Yu. Naumov | 05 March 2021, 14:24:32 UTC | Merge branch 'TRM_THM_update' into 'master' Update the solid thermal expansion calculation in THM and TRM See merge request ogs/ogs!3483 | 05 March 2021, 14:24:32 UTC |
| 650273d | Lars Bilke | 05 March 2021, 09:20:21 UTC | Merge branch 'snakemake-vtkdiff-followup' into 'master' [T] Rule output to stdout in Snakemake. See merge request ogs/ogs!3488 | 05 March 2021, 09:20:21 UTC |
| 91eb420 | Wenqing Wang | 03 March 2021, 16:21:23 UTC | [TRM] Updated the solid thermal expansivity calculation | 05 March 2021, 08:22:51 UTC |
| 5115453 | Wenqing Wang | 03 March 2021, 16:21:08 UTC | [THM] Updated the solid thermal expansivity calculation | 05 March 2021, 08:20:41 UTC |
| 92e636e | Lars Bilke | 05 March 2021, 08:19:42 UTC | [T] Rule output to stdout in Snakemake. Generalized generate_square_mesh output file name. | 05 March 2021, 08:19:42 UTC |
| 9da7dc6 | Dmitry Yu. Naumov | 04 March 2021, 18:21:19 UTC | Merge branch 'snakemake-vtkdiff' into 'master' Small Snakemake refactorings See merge request ogs/ogs!3487 | 04 March 2021, 18:21:19 UTC |
| 48cdafa | Lars Bilke | 04 March 2021, 15:47:58 UTC | [T] Extracted snakemake rule generate_square_mesh. | 04 March 2021, 15:47:58 UTC |
| d7f55ed | Dmitry Yu. Naumov | 04 March 2021, 14:18:23 UTC | Merge branch 'doxy-defines' into 'master' [doxygen] Added preprocessor macros to complete docs. See merge request ogs/ogs!3486 | 04 March 2021, 14:18:23 UTC |
| f092a26 | Lars Bilke | 04 March 2021, 14:00:54 UTC | [T] Use vtkdiff wrapper in VoxelGridFromLayers.smk. | 04 March 2021, 14:00:54 UTC |
| 5c3e978 | Lars Bilke | 04 March 2021, 13:54:19 UTC | [T] Made Snakemake vtkdiff wrapper more generic. Files to compare have to specified explicitly. Added check_mesh option. | 04 March 2021, 13:54:19 UTC |
| 96cd959 | Lars Bilke | 04 March 2021, 12:52:59 UTC | [doxygen] Added preprocessor macros to complete docs. | 04 March 2021, 12:52:59 UTC |
| 6b3b0bd | Dmitry Yu. Naumov | 04 March 2021, 11:13:57 UTC | Merge branch 'THM_fixing' into 'master' [THM] Removed the double declared VariableArray See merge request ogs/ogs!3485 | 04 March 2021, 11:13:57 UTC |
| 1dc27da | Wenqing Wang | 04 March 2021, 08:31:20 UTC | [THM] Removed the double declared VariableArray | 04 March 2021, 08:31:20 UTC |
| 9c1e1b1 | Lars Bilke | 03 March 2021, 11:03:56 UTC | Merge branch 'GhostPartitioningFix' into 'master' [A/U/MP] Correct ghost element information. See merge request ogs/ogs!3481 | 03 March 2021, 11:03:56 UTC |
| 99b500f | Lars Bilke | 03 March 2021, 11:03:22 UTC | Merge branch 'AddFaultToVoxelGrid-workflow' into 'master' Add fault to voxel grid workflow Closes #3103 See merge request ogs/ogs!3470 | 03 March 2021, 11:03:22 UTC |
| 7c5d6ad | Dmitry Yu. Naumov | 03 March 2021, 09:27:50 UTC | Merge branch 'ExcludeDepsFromWarnings' into 'master' Exclude _deps directory from warnings check. See merge request ogs/ogs!3478 | 03 March 2021, 09:27:50 UTC |
| cd2a40b | Thomas Fischer | 03 March 2021, 07:37:11 UTC | [Tests/Data] Fix of ghost data requires update. | 03 March 2021, 08:54:19 UTC |
| 540d0b4 | Lars Bilke | 26 February 2021, 14:04:04 UTC | [T] Replaced AddFaultToVoxelGrid tests with workflow. | 03 March 2021, 08:38:55 UTC |
| fcc5c8a | Thomas Fischer | 24 February 2021, 06:34:42 UTC | [A/U/MP] Correct ghost element information. | 03 March 2021, 05:44:12 UTC |
| e225681 | Dmitri Naumov | 01 March 2021, 22:12:09 UTC | Exclude _deps directory from warnings check. Now this includes the submodules, which are essentially system includes. | 02 March 2021, 22:50:05 UTC |
| a5442d7 | Lars Bilke | 02 March 2021, 21:01:01 UTC | Merge branch 'DoxygenFixes' into 'master' Doxygen fixes See merge request ogs/ogs!3474 | 02 March 2021, 21:01:01 UTC |
| 96780f6 | Lars Bilke | 02 March 2021, 19:47:10 UTC | [ci] Fix check header job | 02 March 2021, 19:47:10 UTC |
| 0af78e8 | Dmitry Yu. Naumov | 02 March 2021, 19:26:23 UTC | Merge branch 'FixSpellingMistakes' into 'master' Fix spelling mistakes. See merge request ogs/ogs!3472 | 02 March 2021, 19:26:23 UTC |
| 0b50451 | Dmitry Yu. Naumov | 02 March 2021, 18:08:29 UTC | Merge branch 'FixALargeCTestTolerance' into 'master' [T/HM] Slightly relax tolerance for sigma. See merge request ogs/ogs!3480 | 02 March 2021, 18:08:29 UTC |
| ae85674 | Dmitri Naumov | 02 March 2021, 17:32:47 UTC | [T/HM] Slightly relax tolerance for sigma. | 02 March 2021, 17:32:47 UTC |
| 635275d | Dmitri Naumov | 02 March 2021, 17:12:37 UTC | [App/IO] Use English in comments. | 02 March 2021, 17:14:46 UTC |
| 9743a42 | Lars Bilke | 02 March 2021, 14:23:11 UTC | [ci] Added codespell check to pre-commit. | 02 March 2021, 17:14:46 UTC |
| 2864654 | Dmitri Naumov | 28 February 2021, 17:47:47 UTC | Fix spelling mistakes. | 02 March 2021, 17:14:46 UTC |
| ed4b925 | Dmitry Yu. Naumov | 02 March 2021, 13:58:43 UTC | Merge branch 'BHE_array_2D' into 'master' Update the python script for the BHE Array 2D benchmark See merge request ogs/ogs!3475 | 02 March 2021, 13:58:43 UTC |
| e245bab | Lars Bilke | 02 March 2021, 13:53:47 UTC | Merge branch 'ci-fix-artifacts' into 'master' [ci] Fixed correct artifact archival. See merge request ogs/ogs!3479 | 02 March 2021, 13:53:47 UTC |
| 728a16d | Lars Bilke | 02 March 2021, 08:18:29 UTC | [ci] Fixed correct artifact archival. | 02 March 2021, 13:20:50 UTC |
| 312fdf9 | Shuang Chen | 01 March 2021, 13:52:50 UTC | [HC/docu] fixed the input parameter typo and equation format errors | 02 March 2021, 11:29:31 UTC |
| bbe08c2 | Shuang Chen | 01 March 2021, 13:48:19 UTC | [HC/script] update the python script of the analytical solver for the BHE array benchmark | 02 March 2021, 11:29:31 UTC |
| 1c17b1e | Dmitry Yu. Naumov | 01 March 2021, 22:08:11 UTC | Merge branch 'ConstraintProcessVariables' into 'master' Update PETSc SNES solver and add I/F for constraint variables. See merge request ogs/ogs!3468 | 01 March 2021, 22:08:11 UTC |
| d0b959f | Dmitri Naumov | 01 March 2021, 13:45:13 UTC | [PL] HM/TM; Fix parameter names in docu. | 01 March 2021, 22:05:39 UTC |
| 11f8aa7 | Dmitri Naumov | 01 March 2021, 13:44:37 UTC | [MatL] KozenyCarman; Add opening latex formula tag | 01 March 2021, 22:05:39 UTC |
