https://github.com/ctlab/phantasus
Revision c2ff4508d7c165cd94f5c289c0ffc6f1b5c687e8 authored by Vladislav Kamenev on 18 December 2018, 14:19:57 UTC, committed by Vladislav Kamenev on 25 December 2018, 16:46:56 UTC
1 parent 8678e0d
Tip revision: c2ff4508d7c165cd94f5c289c0ffc6f1b5c687e8 authored by Vladislav Kamenev on 18 December 2018, 14:19:57 UTC
Update JS
Update JS
Tip revision: c2ff450
loadFromARCHS4.Rd
% Generated by roxygen2: do not edit by hand
% Please edit documentation in R/loadGEO.R
\name{loadFromARCHS4}
\alias{loadFromARCHS4}
\title{Loads expression data from ARCHS4 count files.
Only sapmles with counted expression are kept.
If es already containts expression data it is returned as is.}
\usage{
loadFromARCHS4(es, archs4_files)
}
\arguments{
\item{es}{ExpressionSet from GEO to check for expression in ARCHS4}
\item{archs4_files}{list of available .h5 files from ARCHS4 project}
}
\value{
either original es or an ExpressionSet with loaded count data from ARCHS4
}
\description{
Loads expression data from ARCHS4 count files.
Only sapmles with counted expression are kept.
If es already containts expression data it is returned as is.
}
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