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swh:1:snp:0c004a03453a29b80f921a24433f7e780b9ceb53

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Revision Author Date Message Commit Date
f40fb80 Update JS. Export dataset to R 08 October 2018, 14:29:10 UTC
7bd6668 Export dataset history: finale 08 October 2018, 14:23:26 UTC
5d312a6 Export WIP: RDA 08 October 2018, 13:22:27 UTC
2f2045e Export WIP: deparse 03 October 2018, 16:21:44 UTC
138575a Complex arguments 02 October 2018, 14:13:01 UTC
44d9c73 JS updated. Export tool 28 September 2018, 17:05:04 UTC
ddfede5 exportDatasetHistory WIP 28 September 2018, 17:03:59 UTC
05cb2ad Update JS. Annotation dataset improvement 17 September 2018, 14:55:56 UTC
7679418 Collapse dataset fixes 17 September 2018, 13:27:22 UTC
be43626 Collapse dataset working candidate 17 September 2018, 11:13:29 UTC
deac377 CR collapseDataset 13 September 2018, 02:51:47 UTC
94e82b8 Removed junk 12 September 2018, 12:45:32 UTC
1993293 collapseDataset + tests implemented 12 September 2018, 12:39:01 UTC
f7a87c5 fixes read.gct missing last row/column annotations 11 September 2018, 15:30:01 UTC
1366c31 Merge branch 'develop' of github.com:ctlab/phantasus into develop 11 September 2018, 14:58:16 UTC
e93cb86 Adding quiet option for servePhantasus 11 September 2018, 14:57:51 UTC
cc1ee9d Collapse candidate 11 September 2018, 14:02:51 UTC
f0693d9 Update JS. New tutorial 10 September 2018, 12:24:36 UTC
27fbda8 Update tutorial 08 September 2018, 23:34:46 UTC
06931f9 Update JS. TCGA datasets 06 September 2018, 23:33:28 UTC
db005e4 Update JS 06 September 2018, 09:14:16 UTC
2c001b6 UpdateJS. Rename column 03 September 2018, 14:04:01 UTC
a3a0c44 Rename column implemented 03 September 2018, 14:03:29 UTC
4f0e68f Update JS 03 September 2018, 10:39:01 UTC
211f569 Annotation name implemented 03 September 2018, 10:38:19 UTC
c4ae3a7 Update JS 02 September 2018, 21:10:00 UTC
d79b9ae Implemented onePlusLog2 operation in adjustDataset 02 September 2018, 21:08:51 UTC
7ccb9f0 Update JS. Adjust mirroring disabled in datasets without session 31 August 2018, 01:43:13 UTC
93dc3bd Update JS. Adjust mirroring final 31 August 2018, 01:30:28 UTC
95ed673 Fixed and added test 30 August 2018, 23:03:32 UTC
b908239 Filter pData fix. Vector length conflict 30 August 2018, 06:18:50 UTC
9277ad4 Update JS. Adjust mirroring implemented 30 August 2018, 06:06:25 UTC
253a622 Adjust mirroring fix. Logarithm on negatives 30 August 2018, 06:04:26 UTC
26733f8 Fix phenoData filter 30 August 2018, 03:44:23 UTC
2172598 Adjust mirring 29 August 2018, 02:19:37 UTC
374e842 Update JS. Fix PhantomJS testing 21 August 2018, 13:45:55 UTC
f85260d Update JS. Fix PhantomJS test 21 August 2018, 13:15:52 UTC
540453c Merge branch 'develop' of https://github.com/ctlab/phantasus into develop 20 August 2018, 16:02:19 UTC
6f27642 New probe. New debug mode 20 August 2018, 15:59:48 UTC
b0d09e9 Update_static versioning FIX 13 August 2018, 19:01:41 UTC
102bcd1 Update JS. Adjust tool 13 August 2018, 16:40:39 UTC
d0d5b4d Fixed update_static.js versioning 13 August 2018, 16:23:49 UTC
c28b816 Update JS 13 August 2018, 16:17:45 UTC
28791c5 Calculated annotation full mirror implemented 13 August 2018, 16:14:13 UTC
6298a56 Another JS version report 13 August 2018, 14:20:47 UTC
94ca5d1 Calculated annotation mirror implemented 13 August 2018, 13:07:10 UTC
893b1c8 Travis JS versioning implemented 13 August 2018, 12:50:05 UTC
bc3f225 update static 07 August 2018, 12:34:59 UTC
9f7b6d4 Merge pull request #85 from ctlab/develop Develop 07 August 2018, 09:41:33 UTC
39a8be5 Update JS. PCA Plot performance fix 06 August 2018, 15:13:35 UTC
d161af9 Update JS. Filters with empty values 06 August 2018, 14:01:52 UTC
bc6f335 Typo in tutorial 06 August 2018, 12:16:59 UTC
a19fffe JS update. Filter hotfix 06 August 2018, 11:11:02 UTC
fd6158b Version bump to 1.1.3 in DESCRIPTION 06 August 2018, 10:21:16 UTC
ebfcedb Update JS. GSEA tool fixed 06 August 2018, 09:52:58 UTC
e41578d One docker for all 03 August 2018, 12:50:13 UTC
c0fa1e7 Preserving annotation order in GSEA heatmap 01 August 2018, 20:31:01 UTC
5006318 Fixed package check warnings 01 August 2018, 18:18:39 UTC
2f41a12 Updated JS for GSEA with heatmap 01 August 2018, 17:25:49 UTC
6a80938 gsea heatmap wip 01 August 2018, 15:46:46 UTC
4e1551c Update JS. New filters. Removed DevAPI 31 July 2018, 16:11:10 UTC
ae30336 Fixed man for subsetES function 31 July 2018, 16:09:34 UTC
590670e Update JS. Bootstrap-select size limited 31 July 2018, 11:06:16 UTC
cc5eb58 Fixed NA replacing in kmeans, pcaplot 31 July 2018, 10:30:22 UTC
0ba714f Update JS. Another fix for session inheritance 31 July 2018, 10:06:58 UTC
e6ce451 Added NA test to pcaPlot 31 July 2018, 10:04:24 UTC
c456f79 Revert "slight optimization for k-means and pca" This reverts commit 2c053b597041bf04e31de4e71dd22f31f0ec6b52. 31 July 2018, 09:51:51 UTC
b573534 gseaPlot fix after subset 30 July 2018, 16:13:06 UTC
2c053b5 slight optimization for k-means and pca 30 July 2018, 15:27:39 UTC
263ba68 Update JS. Sweep test implemented 30 July 2018, 14:02:43 UTC
af8e0ab Miscommit lower-case file 30 July 2018, 13:09:06 UTC
f494947 New heatmap revamped. Creating session by subsetting ES 30 July 2018, 12:52:05 UTC
6e64657 Update JS. Adjust test fix 30 July 2018, 11:54:39 UTC
bdd48bc Update JS. Sweep tool 30 July 2018, 11:24:26 UTC
78c6505 setting oepncpu master home 27 July 2018, 14:27:58 UTC
b897a79 Update JS. New GSEA. Some fixes for SlicedDataset ESSessions 25 July 2018, 07:59:14 UTC
a46bc6c Latest docker -> develop docker 20 July 2018, 11:15:27 UTC
9954ebf Merge pull request #84 from ctlab/kamenv Kamenv to develop 19 July 2018, 23:53:46 UTC
c7f158d Update JS. Rebase fixed 19 July 2018, 23:02:52 UTC
0b99be8 Rebased on master with Vertical GSEA R fixes 19 July 2018, 21:03:48 UTC
5621e8a updated js 19 July 2018, 21:03:48 UTC
0306436 Reworked limma. Reworked k-means. Reworked gseaPlot. Reworked shinyGAM. Reworked PCAplot. Fixed mans. Probe dataset implemented 19 July 2018, 21:03:48 UTC
d144ef5 Merge pull request #83 from ctlab/vertical-gsea-hotfix Vertical GSEA in R 19 July 2018, 16:08:31 UTC
cb73613 Vertical GSEA in R 19 July 2018, 13:54:09 UTC
343aff8 Vertical GSEA plot 10 July 2018, 13:03:13 UTC
9d243ab pushed js changes to phantasus.js 09 July 2018, 14:31:19 UTC
74cabe3 240 seconds timeout for phantomjs 07 July 2018, 17:25:33 UTC
fea33c8 240 seconds for geo_reader_test 07 July 2018, 17:05:56 UTC
e658f83 timeout of 240 seconds 07 July 2018, 16:52:44 UTC
8f2cc74 changed timeout in test 07 July 2018, 15:45:46 UTC
eec4329 More robust loading from ARCHS4 (no need to provide GPLs) 07 July 2018, 12:05:59 UTC
7860af3 JS: fixed double createES for TCGA data 02 June 2018, 09:13:22 UTC
df7331d Fixing docker - 3 01 June 2018, 21:42:05 UTC
17d3930 fixing dockerfile 2 26 May 2018, 17:50:43 UTC
7279392 Fixing dockerfile 26 May 2018, 17:21:56 UTC
e2cc211 missed R-3.5 dependency 26 May 2018, 16:54:29 UTC
5bbbc4a Merge branch 'master' of github.com:ctlab/phantasus 26 May 2018, 16:53:09 UTC
de106a7 Switch to r-3.5 and protobuf-3.5 in docker 26 May 2018, 16:52:13 UTC
339174c Switch back to r-release in appveyor 24 May 2018, 20:18:13 UTC
ee7962c forcing libcurl and better handling for downloading errors 24 May 2018, 19:58:27 UTC
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