Revision 66357a4654bfe45c5fe4a9565bdf67d7b5a6f05c authored by clevermx on 18 January 2022, 11:09:39 UTC, committed by Space on 18 January 2022, 11:09:39 UTC
Add meta-files generation for new counts processing. Add support for 8+ versions of ARCHs4. Co-authored-by: Alexey Sergushichev <alserg@itmo.ru> Merge-request: PHANTASUS-MR-21 Merged-by: Maksim Kleverov <klevermx@gmail.com>
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File | Mode | Size |
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adjustDataset.Rd | -rw-r--r-- | 1.2 KB |
annotationDBMeta.Rd | -rw-r--r-- | 500 bytes |
calcPCA.Rd | -rw-r--r-- | 573 bytes |
calculatedAnnotation.Rd | -rw-r--r-- | 828 bytes |
checkGPLsFallback.Rd | -rw-r--r-- | 606 bytes |
colMeansByGroups.Rd | -rw-r--r-- | 424 bytes |
collapseDataset.Rd | -rw-r--r-- | 883 bytes |
convertByAnnotationDB.Rd | -rw-r--r-- | 891 bytes |
createES.Rd | -rw-r--r-- | 964 bytes |
es.Rd | -rw-r--r-- | 402 bytes |
fgseaExample.Rd | -rw-r--r-- | 262 bytes |
generatePreloadedSession.Rd | -rw-r--r-- | 1.4 KB |
getArchs4Files.Rd | -rw-r--r-- | 386 bytes |
getES.Rd | -rw-r--r-- | 1.1 KB |
getGDS.Rd | -rw-r--r-- | 874 bytes |
getGSE.Rd | -rw-r--r-- | 946 bytes |
gseaPlot.Rd | -rw-r--r-- | 1.1 KB |
limmaAnalysis.Rd | -rw-r--r-- | 729 bytes |
loadCounts.Rd | -rw-r--r-- | 858 bytes |
loadFromARCHS4.Rd | -rw-r--r-- | 748 bytes |
loadGEO.Rd | -rw-r--r-- | 982 bytes |
loadPreloaded.Rd | -rw-r--r-- | 627 bytes |
performKmeans.Rd | -rw-r--r-- | 641 bytes |
queryAnnotationDBMeta.Rd | -rw-r--r-- | 446 bytes |
read.gct.Rd | -rw-r--r-- | 453 bytes |
reparseCachedESs.Rd | -rw-r--r-- | 788 bytes |
reproduceInR.Rd | -rw-r--r-- | 647 bytes |
servePhantasus.Rd | -rw-r--r-- | 1.0 KB |
shinyGAMAnalysis.Rd | -rw-r--r-- | 438 bytes |
subsetES.Rd | -rw-r--r-- | 579 bytes |
write.gct.Rd | -rw-r--r-- | 676 bytes |
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