https://github.com/gantzgraf/vcfhacks
Tip revision: 3562e8259962845210e7cb66c4e56855ec002afe authored by David A. Parry on 05 January 2017, 13:11:52 UTC
compare vcf variants
compare vcf variants
Tip revision: 3562e82
| File | Mode | Size |
|---|---|---|
| accessories | ||
| bin_tests | ||
| data | ||
| install_modules | ||
| lib | ||
| make_binaries | ||
| t | ||
| unmaintained | ||
| vep_plugins | ||
| .gitmodules | -rw-r--r-- | 346 bytes |
| LICENSE.txt | -rw-r--r-- | 34.3 KB |
| annotateSnps.pl | -rwxr-xr-x | 45.4 KB |
| annovcfToSimple.pl | -rwxr-xr-x | 39.0 KB |
| burdenTest.pl | -rwxr-xr-x | 3.0 KB |
| changes.md | -rw-r--r-- | 22.4 KB |
| combineGeneCounts.pl | -rw-r--r-- | 1.9 KB |
| countVariants.pl | -rwxr-xr-x | 403 bytes |
| countVcfCalls.pl | -rwxr-xr-x | 8.6 KB |
| examples.md | -rw-r--r-- | 15.5 KB |
| examples_bin.md | -rw-r--r-- | 15.8 KB |
| filterGts.pl | -rwxr-xr-x | 8.3 KB |
| filterOnEvsMaf.pl | -rwxr-xr-x | 22.3 KB |
| filterOnSample.pl | -rwxr-xr-x | 38.4 KB |
| filterVcfOnLocation.pl | -rwxr-xr-x | 7.5 KB |
| filterVcfOnVcf.pl | -rwxr-xr-x | 55.9 KB |
| findBiallelic.pl | -rwxr-xr-x | 87.3 KB |
| geneAnnotator.pl | -rwxr-xr-x | 67.9 KB |
| getFunctionalVariants.pl | -rwxr-xr-x | 82.9 KB |
| getHetVariants.pl | -rwxr-xr-x | 3.3 KB |
| getSampleNames.pl | -rwxr-xr-x | 3.4 KB |
| getVariantsByLocation.pl | -rwxr-xr-x | 21.4 KB |
| gpl.txt | -rw-r--r-- | 34.3 KB |
| hgmdMartToVcf.pl | -rwxr-xr-x | 12.7 KB |
| rankOnCaddScore.pl | -rwxr-xr-x | 15.5 KB |
| readme.md | -rw-r--r-- | 6.4 KB |
| removeVariantInfoFields.pl | -rwxr-xr-x | 2.1 KB |
| renameSamples.pl | -rwxr-xr-x | 4.6 KB |
| sampleCallsToInfo.pl | -rwxr-xr-x | 13.5 KB |
| selectSampleCalls.pl | -rwxr-xr-x | 2.8 KB |
| sortVcf.pl | -rwxr-xr-x | 4.0 KB |
| vcfToSnpViewer.pl | -rwxr-xr-x | 8.5 KB |
