https://github.com/gantzgraf/vcfhacks
History
Tip revision: 0d21ad7e9688de6c484e4b1151443d1b9292009e authored by David A. Parry on 16 March 2018, 13:52:51 UTC
add geneAnnotatorDb.zip link
Tip revision: 0d21ad7
File Mode Size
accessories
bin_tests
data
install_modules
lib
make_binaries
t
unmaintained
vep_plugins
.gitmodules -rw-r--r-- 346 bytes
LICENSE.txt -rw-r--r-- 34.3 KB
annotateSnps.pl -rwxr-xr-x 44.5 KB
annovcfToSimple.pl -rwxr-xr-x 39.0 KB
changes.md -rw-r--r-- 22.4 KB
countVariants.pl -rwxr-xr-x 403 bytes
countVcfCalls.pl -rwxr-xr-x 8.6 KB
examples.md -rw-r--r-- 15.5 KB
examples_bin.md -rw-r--r-- 15.8 KB
filterGts.pl -rwxr-xr-x 8.0 KB
filterOnEvsMaf.pl -rwxr-xr-x 21.3 KB
filterOnSample.pl -rwxr-xr-x 37.3 KB
filterVcfOnLocation.pl -rwxr-xr-x 7.5 KB
filterVcfOnVcf.pl -rwxr-xr-x 55.1 KB
findBiallelic.pl -rwxr-xr-x 87.4 KB
geneAnnotator.pl -rwxr-xr-x 68.7 KB
geneBurdenTest.pl -rwxr-xr-x 56.1 KB
getFunctionalVariants.pl -rwxr-xr-x 83.0 KB
getHetVariants.pl -rwxr-xr-x 3.7 KB
getSampleNames.pl -rwxr-xr-x 3.4 KB
getVariantsByLocation.pl -rwxr-xr-x 21.4 KB
gpl.txt -rw-r--r-- 34.3 KB
hgmdMartToVcf.pl -rwxr-xr-x 12.7 KB
rankOnCaddScore.pl -rwxr-xr-x 15.4 KB
readme.md -rw-r--r-- 6.8 KB
removeVariantInfoFields.pl -rwxr-xr-x 2.1 KB
renameSamples.pl -rwxr-xr-x 4.6 KB
sampleCallsToInfo.pl -rwxr-xr-x 13.1 KB
selectSampleCalls.pl -rwxr-xr-x 2.8 KB
sortVcf.pl -rwxr-xr-x 4.0 KB
vcfToSnpViewer.pl -rwxr-xr-x 8.5 KB

readme.md

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