https://github.com/gantzgraf/vcfhacks
Tip revision: ceba11a219f3daf5cde976d66a57019bd2d0d55b authored by David A. Parry on 11 December 2014, 15:14:19 UTC
version 0.1.15 update
version 0.1.15 update
Tip revision: ceba11a
| File | Mode | Size |
|---|---|---|
| DbnsfpVcfFilter.pm | -rw-r--r-- | 41.0 KB |
| LICENSE.txt | -rw-r--r-- | 34.3 KB |
| ParsePedfile.pm | -rw-r--r-- | 13.2 KB |
| ParseVCF.pm | -rw-r--r-- | 90.5 KB |
| SortGenomicCoordinates.pm | -rw-r--r-- | 24.7 KB |
| SpliceConsensus.pm | -rw-r--r-- | 4.7 KB |
| SpliceConsensusFilter.pm | -rw-r--r-- | 3.4 KB |
| TextToExcel.pm | -rw-r--r-- | 12.1 KB |
| VcfReader.pm | -rw-r--r-- | 112.3 KB |
| annotateSnps.pl | -rwxr-xr-x | 35.1 KB |
| annovcfToSimple.pl | -rwxr-xr-x | 27.3 KB |
| countVariants.pl | -rwxr-xr-x | 365 bytes |
| countVcfCalls.pl | -rwxr-xr-x | 8.4 KB |
| ensemblGeneAnnotator.pl | -rwxr-xr-x | 48.6 KB |
| examples.md | -rw-r--r-- | 12.1 KB |
| examples.rtf | -rw-r--r-- | 14.4 KB |
| examples.txt | -rw-r--r-- | 12.0 KB |
| filterOnEvsMaf.pl | -rwxr-xr-x | 19.5 KB |
| filterOnSample.pl | -rwxr-xr-x | 33.8 KB |
| filterVcfOnLocation.pl | -rwxr-xr-x | 7.4 KB |
| filterVcfOnVcf.pl | -rwxr-xr-x | 47.2 KB |
| findBiallelicSnpEff.pl | -rwxr-xr-x | 59.5 KB |
| findBiallelicVep.pl | -rwxr-xr-x | 57.8 KB |
| getFunctionalVariantsSnpEff.pl | -rwxr-xr-x | 34.4 KB |
| getFunctionalVariantsVep.pl | -rwxr-xr-x | 29.5 KB |
| getHetVariants.pl | -rwxr-xr-x | 2.9 KB |
| getSampleNames.pl | -rwxr-xr-x | 2.7 KB |
| getVariantsByLocation.pl | -rwxr-xr-x | 13.7 KB |
| gpl.txt | -rw-r--r-- | 34.3 KB |
| rankOnCaddScore.pl | -rwxr-xr-x | 14.7 KB |
| readme.md | -rw-r--r-- | 29.8 KB |
| sampleCallsToInfo.pl | -rwxr-xr-x | 13.4 KB |
| sortVcf.pl | -rwxr-xr-x | 3.8 KB |
| splitMultiallelicVariants.pl | -rwxr-xr-x | 4.5 KB |
| vcfToSnpViewer.pl | -rwxr-xr-x | 8.4 KB |
