https://github.com/gantzgraf/vcfhacks
History
Tip revision: fad2fead99ffa6df9c6347c0193bb0c35ea8ab5f authored by David A. Parry on 19 December 2015, 13:16:39 UTC
add PL and phasing info
Tip revision: fad2fea
File Mode Size
data
lib
make_binaries
par
unmaintained
vep_plugins
.gitmodules -rw-r--r-- 314 bytes
LICENSE.txt -rw-r--r-- 34.3 KB
annotateSnps.pl -rwxr-xr-x 42.2 KB
annovcfToSimple.pl -rwxr-xr-x 37.1 KB
checkInheritance.pl -rwxr-xr-x 13.4 KB
clinSummarizer.pl -rwxr-xr-x 29.1 KB
countVariants.pl -rwxr-xr-x 381 bytes
countVcfCalls.pl -rwxr-xr-x 8.6 KB
examples.md -rw-r--r-- 15.4 KB
examples.txt -rw-r--r-- 13.2 KB
examples_bin.md -rw-r--r-- 15.7 KB
filterOnEvsMaf.pl -rwxr-xr-x 22.0 KB
filterOnSample.pl -rwxr-xr-x 35.5 KB
filterVcfOnLocation.pl -rwxr-xr-x 7.4 KB
filterVcfOnVcf.pl -rwxr-xr-x 53.0 KB
findBiallelic.pl -rwxr-xr-x 76.2 KB
geneAnnotator.pl -rwxr-xr-x 66.3 KB
getFunctionalVariants.pl -rwxr-xr-x 49.5 KB
getHetVariants.pl -rwxr-xr-x 3.3 KB
getSampleNames.pl -rwxr-xr-x 2.7 KB
getVariantsByLocation.pl -rwxr-xr-x 19.2 KB
gpl.txt -rw-r--r-- 34.3 KB
hgmdMartToVcf.pl -rwxr-xr-x 12.6 KB
rankOnCaddScore.pl -rwxr-xr-x 15.6 KB
readme.md -rw-r--r-- 23.1 KB
removeVariantInfoFields.pl -rwxr-xr-x 2.0 KB
renameSamples.pl -rwxr-xr-x 3.6 KB
sampleCallsToInfo.pl -rwxr-xr-x 13.4 KB
selectSampleCalls.pl -rwxr-xr-x 2.8 KB
sortVcf.pl -rwxr-xr-x 3.8 KB
vcfToSnpViewer.pl -rwxr-xr-x 8.4 KB

readme.md

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